Gene Coch_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1516 
Symbol 
ID8367956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1801037 
End bp1802194 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content43% 
IMG OID644983951 
Productgalactokinase 
Protein accessionYP_003141622 
Protein GI256820343 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACT TAGAACAAAA GTTTCAAGAA GTTTTCGGTG CTCCTGCCGA AAAACAATTC 
TTCGCACCAG GACGTGTGAA TCTCATCGGT GAACATACCG ACTACAATGG CGGTAATGTG 
TTCCCTTGCG CTATCGACAA AGGCACTTAC GGTCTCGTAA AAAAACGCAA TGACCGCAAA 
TTCCGTATGT ATTCTGAAAA CTTTGCCGAC CTTGGCGTAA TGGAGTTCAC CCTCGACGAA 
CTTACCAACG ACAAAAAACA CGATTGGGCT AACTACCCAA AAGGTGTGAT TAAAATGTTC 
CTCGAAGCAG GACAAAAAAT CGACTCTGGG TTCGATATTC TCTTCTCTGG GAATATCCCT 
AATGGCGCAG GACTTTCTTC TTCTGCTTCT ATTGAGATGC TTACCGCTAT TGTGCTAAAA 
GACCTCTTCC ATCTCTCTAT CGACTCTGTG GAAATGGCGC AATTAGGCAA GAAAACTGAA 
AACCTATTCA TTGGGGTAAA CTCTGGTATT ATGGACCAAT TTGCGATAGC TATGGGTAAG 
AAAGACCACG CTATCCTCCT CGATTGCAAC ACACTCAAAT ATGCCTATGT GCCTGTGGTA 
CTTAAAGATG AGGTAATCGT GATTGCCAAT ACTAACAAAC GTCGTGGTCT CGCCGATTCT 
AAATACAACG AACGCCGTGC TGAATGTGAT GAAGCCTTAG CCGAATTGCA AACTAAATTG 
CCTATTAAAG CCTTAGGAGA ACTCTCTATT GAACAATTTG AAGCCAACAA AGACCTCATC 
AAGAGTCCCG TTCGCCAAAA AAGAGCTAAA CACGCAGTAT ATGAAAACCA ACGCACTCTT 
AAAGCACAAA AAGAGCTTTC AGCAGGTAAT TTAGCTGAGT TTGGTAAGTT AATGAACCAA 
TCGCACATTT CTTTGCGCGA CGATTATGAG GTAACAGGCG TAGAACTCGA TACTTTGGTT 
GCTCTTGCTT GGGAACAACC TGGAGTAGTA GGTTCGCGTA TGACGGGAGC AGGCTTTGGC 
GGTTGCACTG TAAGCATCGT GAAAAAAGAC AAAGTAGACG ATTTTATTAA AAATGTAGGC 
GAGGCTTACA AAAACAAAAT AGGATATGCT GCCGATTTTT ATATCGCTTC TGTGAGCGAC 
GGCGCTAAAA AACTATAA
 
Protein sequence
MKHLEQKFQE VFGAPAEKQF FAPGRVNLIG EHTDYNGGNV FPCAIDKGTY GLVKKRNDRK 
FRMYSENFAD LGVMEFTLDE LTNDKKHDWA NYPKGVIKMF LEAGQKIDSG FDILFSGNIP 
NGAGLSSSAS IEMLTAIVLK DLFHLSIDSV EMAQLGKKTE NLFIGVNSGI MDQFAIAMGK 
KDHAILLDCN TLKYAYVPVV LKDEVIVIAN TNKRRGLADS KYNERRAECD EALAELQTKL 
PIKALGELSI EQFEANKDLI KSPVRQKRAK HAVYENQRTL KAQKELSAGN LAEFGKLMNQ 
SHISLRDDYE VTGVELDTLV ALAWEQPGVV GSRMTGAGFG GCTVSIVKKD KVDDFIKNVG 
EAYKNKIGYA ADFYIASVSD GAKKL