Gene Coch_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1489 
Symbol 
ID8367926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1771473 
End bp1772600 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content41% 
IMG OID644983922 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_003141596 
Protein GI256820317 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA TCAAAGAAAA ATTAGCTGAA CGTGAAGCTC ATAATGCCTT ACGCAGTCTC 
AAACAACGCC ATTTTGCTAT TGATTTCTAC TCCAATGATT ATATAGGATT CAGTACAAAT 
TCTGAGATTA CTAAACGCAT CTCTCAATTA CTCCCTCAGC AAACAGCACC TCACGGGGCT 
ACAGGATCGC GATTGCTTTC GGGTAACTTG CCTATCTTTT CCGAAACCGA AAGCTATATA 
GCCCATTTTC ATAACGCCGA AACAGCTCTT TTGTACAATT CGGGCTATGA TGCCAATGTG 
GGATTCTTCT CCTGTATCGT AGGGCGAGGT GATATTATTT TATACGATAG TTACAGCCAC 
GCTTCTATAC GCGACGGTAT TTCACTGAGT TTAGCCAACT CCTATAAGTT TAAACATAAT 
GATTTAGACG ATTTAGAAAA GCTCTTAAAA AAGTTTGCTT TCCCTGATAA AACGGTGCTC 
ATCGTTACTG AAACAGTTTT TTCAATGGAC GGTGATAGTC CTGATTTGGT GCGTTTGGTA 
ACATTAGCAA AGCAGTATGG GGCTTATATA GCGGTAGACG AAGCTCACGC CATAGGAGTA 
TTTGGCAAAC ACGGCTGTGG ATTGGTGCAA GCATTGGGGG TGGAAGAAGA AATTTTTGCC 
CGCATCGTTA CCTTCGGGAA AGGCTTGGGA GCACACGGAG CTGCTGTCTT AGCTTCAAAT 
GAGGTGATAC AGTATTTAGT GAACTTTTCA CGCTCTTTCA TATATACTAC TGCTATGAGT 
CCACATAGTG TGGCAACTAT TAGGGCAGGA TATGAGACCT TACAGACAAC TAAATCAATA 
GAACAACTGC ATCATAATAT ACAGTATTTT AAAACGCAAA TTGCCAAATA CAAAATACAG 
GGTTTTATTC CTTCTGATTC GGCTATTCAA GCCATAGTAG TAGCAGGCAA TGAACGAGTG 
AAAGCACTTG CCAAAGTACT ACAAGCCCAA GATATAGGCG TATTACCGAT TTTAGCACCC 
ACCGTACCTG CGGGACAAGA ACGCCTGAGA ATATGCTTGC ACAGTTTTAA TACCGAACAA 
GAAATCGAAA AGTTAATGAG CCAATTAGCC AGTTTGTCAA TTATCTGA
 
Protein sequence
MKHIKEKLAE REAHNALRSL KQRHFAIDFY SNDYIGFSTN SEITKRISQL LPQQTAPHGA 
TGSRLLSGNL PIFSETESYI AHFHNAETAL LYNSGYDANV GFFSCIVGRG DIILYDSYSH 
ASIRDGISLS LANSYKFKHN DLDDLEKLLK KFAFPDKTVL IVTETVFSMD GDSPDLVRLV 
TLAKQYGAYI AVDEAHAIGV FGKHGCGLVQ ALGVEEEIFA RIVTFGKGLG AHGAAVLASN 
EVIQYLVNFS RSFIYTTAMS PHSVATIRAG YETLQTTKSI EQLHHNIQYF KTQIAKYKIQ 
GFIPSDSAIQ AIVVAGNERV KALAKVLQAQ DIGVLPILAP TVPAGQERLR ICLHSFNTEQ 
EIEKLMSQLA SLSII