| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1480 |
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| Symbol | |
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| ID | 8367917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1753684 |
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| End bp | 1754913 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983913 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_003141587 |
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| Protein GI | 256820308 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAC AATTACCTCA TTCCACATTA CAGTCAGGAA AACATTTGTT GCTCTCAGGC
TCCAAGTCCG AAAGCAATAG AGTGCTTATA TTGCAAGCGC TCTTCCCTGA ACTCACTGTG
CAAAACCTCT CCACTGCCGA TGATACCCTA CTGCTACAAC AAGCTCTTAG CTCTCACACA
GAAGTTGTAG ACATTCATCA CGCAGGTACT GCAATGCGCT TTCTCACCGC TTATTTTGCA
ATACAGCAGG GCAAAGAAGT GCTTCTCACA GGTTCTCCCC GAATGAAAGA AAGACCCATA
AACCTATTAG TAAATGCATT ACAACAGTTA GGTGCCGATA TTACATATAC TGAAAAAGAA
GGATTTCCAC CTATATATAT AAGGGGGAAA AAGCTTATTA ACAACGAAAT ACATATCCAA
GGTAACGTCA GTAGTCAGTA CAGCTCAGCT TTATTGCTTA TTGCTCCTGC TTTGCCTAAC
GGACTCACTT TGCATTTGGA AGGCGAAGTT ACCTCTCTGC CTTACTTAAA AATGACTACC
AATCTCTTAG CTCATTGCAT AGGACAAGAG CAAGTGTTGT TCAAAGCTAA TACTATAAAG
GTAAACACAA TGAACGGAAA AAACTTACTA CATAACAGTT GGGAAGTAGA ATCCGATTGG
TCTTCCGCCT CCTATTGGTA TGCTTTTGTC GCCTTATCGC CCATAGGCAC CACCCTTTCA
TTGTCCTATT TTAAATCGCA TAGCTTGCAA GGTGATAGTG CCTTAAAAAC TATTTATGAG
TTTTTTGGAG TGCACTCCTC ATTCAAAGGT AATGAATTAA CCATTGAAAA AGTAGCTGAA
CCTCAACAAA AGCGTTTCGA GTATAACCTA AATGCCACCC CCGATATAGC ACAAACCATT
GCCGTTACTT GCGTAGCAAT GGGCTTAGAG TGCCATTTAA CAGGCTTACA CACTCTTAAA
ATCAAAGAAA CCGACCGTCT TCAAGCACTA CAAACCGAAC TGAGAAAGTT AGGAGCCGAT
GTAAGTACTA CTCACGACAG CTTGCATTTA GCACCTTGCC CACACTTGCG CTCTGGTATT
AGCATTGCTA CCTATAACGA CCATCGAATG GCAATGGCTT TCACACCTTT GATGCTAAAA
ACTAACCTCG AAATAGCTGA TAAAGAAGTT GTGAGCAAAT CCTATCCTTC TTTTTGGCAC
GACGTAGCAC AGCTTACAGT TAAAAGATAA
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| Protein sequence | MNIQLPHSTL QSGKHLLLSG SKSESNRVLI LQALFPELTV QNLSTADDTL LLQQALSSHT
EVVDIHHAGT AMRFLTAYFA IQQGKEVLLT GSPRMKERPI NLLVNALQQL GADITYTEKE
GFPPIYIRGK KLINNEIHIQ GNVSSQYSSA LLLIAPALPN GLTLHLEGEV TSLPYLKMTT
NLLAHCIGQE QVLFKANTIK VNTMNGKNLL HNSWEVESDW SSASYWYAFV ALSPIGTTLS
LSYFKSHSLQ GDSALKTIYE FFGVHSSFKG NELTIEKVAE PQQKRFEYNL NATPDIAQTI
AVTCVAMGLE CHLTGLHTLK IKETDRLQAL QTELRKLGAD VSTTHDSLHL APCPHLRSGI
SIATYNDHRM AMAFTPLMLK TNLEIADKEV VSKSYPSFWH DVAQLTVKR
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