Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1430 |
Symbol | |
ID | 8367862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1675325 |
End bp | 1677673 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644983858 |
Product | hypothetical protein |
Protein accession | YP_003141537 |
Protein GI | 256820258 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.332102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCATTC TTTTTTACAT AACGCTGTTT TTATCCCTGC TCGCCTGCGA TTCCAAAGAG AAGAAAGAGG AGGTAACACC CTTGCTCTTC CCCGATAATA CGCAAATGCT TTTCCGCATC AACGATAAAG ACAACTTCCT CAGTGCCATT GCTAACAATA CCTTTTGGAA AACGCACAAT CCTCATCAGT TGCGCCCACA CGAGGTAAAA CTCCTTAATA GCATTCCCAC CGATGATAAC TTGTGGGTAG CTTTTGATAC CGAAGGTCAT TTCTTTGCCA TAACTCCCCG TATTAGTAAC GATACTATTA GTTTTTGGCG CAATGCCGAT ACTCAAATCC AAAAACAAGC TCAGTTTGGT AAAGAATGGT TTTACACCAT AGCCGATAAC AACTTGGTTA TAGGCGATTC CGAGACTGTT GCGGCTTATC AACAACTGAA ACAAGAAACT AAAACACCAC GGCAACAGTC TTTGGAACAA CTCCAAAAAG TAGGTAATAC CGAATGCGTT GCCACTCTTT TCTTCCAAAA AGACGAAGCA AATGCTTACT TCAAATCGTT TTTCGGAACT GAGATATTGC AAAATGTAAA AGATTGGGTC TCTCTCGACC TTTTCTTAGA AGAAAACAAC ATACGTTTTA GCGGTATGGC GCTCATTGCC AATGCCAATG CCGATATAAT GGCACACACC CTACCCTATC AAAACAATGT GTTAAACGTA CTTCCCGCGC GCTTGCGTTC ACTCGTTTCT TACACTTTCG ACGACGGCGA TAAGCTCGCT CAAAACGATA GTACAGCTAC CAATAATCCG TTTAAAACCT CTATCAATGG GGTAGCTTTC GCTCAAACCC CCGAAGGTCA ATTTGCTGTC GCCTCTTCTT TTGATGTAGA TGAGACCATC AAACAGTTGC CCGTACTCTC AGAAGACTTT CAGCACAACT TCTCTATGTA CGAACTAAAC CCCGACCTTC CAATGGATTT TTTCACGGCT TTTGTACCTC AGTTTGTCCC TAAATACGTC GGAGTGTATG AAAAGTTTCT CGTGTTTACT ACCACCAAAG ACCTTCTTAC CTCAGTAATC AACGATATGC AACGAGGCAA TGTGCTTTCA GCCAATAAAT CTTACGATTG GTTAGAACAA AACAGCGCTT CCAACGTGAG TGTTACACGG CTCACAAATC TTTATGACAA CACAGCTTTT AGCAGTAAAT ATCCTTATAT AGCCGAAAAC TATCGCTGGG CAGTATTCCA ACAAACCCCT CAAAACGACT ATTACGTGCT CAATTTCATC AGTCAAAAAC AAACTGAAAG CACTCTTTCC GATGAAATGA AAGAACGTTT CCGCCTTACG TTAGACGACC AAATGGTTAT TCCTCCTACC ATTCTCTTAA ACCACCGCAC CAAACAACTC GAAATAGCCG TGCAAGACAC CAATAACGAT TTATATCTGA TAGGTAACAA CGGTTCTCTC TTGTGGAAAA AACGCTTAGA CGGAAAGATA CAAAGCCCTA TTTACCAGGT CGATTTATTT AAAAACGGCT TCTTGCAAAT GGCTTTCACT ACCGAAAAGT CTATCTGGAT TATTGACCGC AACGGCAATG TGGTAGAGCC TTTCCCTCTA AAATATCAAA ACCCTATCAC ACCTTTGGAG GTGTTCGATT ACGATAGCAA TCGCGAATAC CGCTTCCTCT TTGCCGAAAA CAATATCTTG CACCTGTTAG ACAGAAAAGG ACAACAAGTG AAAGGCTTCT TACAGCGCAC CAATGGAAAA CCTTTGTTTA CTCCTAAGCA TTACCGTTTC AATGGCAAAG ACTATCTTAT CTACCCTTCC GATAATGGTA TCTTTAATAT CTTGCACCGC AACGGTGAAA ACAGAATAAC AGTAAAGGGT AACTATCGTT TCTCCAACAA TCCTCCTTTG GTATTCAATA ACTTGTTTAT GTTCACCACT CAAGAAGGTA ACCTTATTTC TATCGATGAG AAAGGAGGAA TGAATCGCAC AAATCCATCG CTGGTAGAAC CCTTTTATTG GGAAGGTAAT CGTTATGCTC TTACCTCTCT TTCAGCCAAT ATACTTACCA TAGGCGGGCA ACGCATTGAA CTTCCCGAAG GTAAATATGC CCGTCCTAAA CAGTTCCGTA TTCGTGGCAT CAACTACGTC TCAGTAAACG AACAGAACAC CAAAAAAGCC TATTTATACG ACGAAAAAGG AAAATTGTTA AAAGACTTTC CCGTAGAATC AGTATCCCCC ATTGCAATAG ATGTAGATTT AGATAAATCT ATTTGGATAG TTACTGAAAA ATCACCCACT GAATTGGTGC TATACACTAT GAGACAATTA GCTAATTAA
|
Protein sequence | MRILFYITLF LSLLACDSKE KKEEVTPLLF PDNTQMLFRI NDKDNFLSAI ANNTFWKTHN PHQLRPHEVK LLNSIPTDDN LWVAFDTEGH FFAITPRISN DTISFWRNAD TQIQKQAQFG KEWFYTIADN NLVIGDSETV AAYQQLKQET KTPRQQSLEQ LQKVGNTECV ATLFFQKDEA NAYFKSFFGT EILQNVKDWV SLDLFLEENN IRFSGMALIA NANADIMAHT LPYQNNVLNV LPARLRSLVS YTFDDGDKLA QNDSTATNNP FKTSINGVAF AQTPEGQFAV ASSFDVDETI KQLPVLSEDF QHNFSMYELN PDLPMDFFTA FVPQFVPKYV GVYEKFLVFT TTKDLLTSVI NDMQRGNVLS ANKSYDWLEQ NSASNVSVTR LTNLYDNTAF SSKYPYIAEN YRWAVFQQTP QNDYYVLNFI SQKQTESTLS DEMKERFRLT LDDQMVIPPT ILLNHRTKQL EIAVQDTNND LYLIGNNGSL LWKKRLDGKI QSPIYQVDLF KNGFLQMAFT TEKSIWIIDR NGNVVEPFPL KYQNPITPLE VFDYDSNREY RFLFAENNIL HLLDRKGQQV KGFLQRTNGK PLFTPKHYRF NGKDYLIYPS DNGIFNILHR NGENRITVKG NYRFSNNPPL VFNNLFMFTT QEGNLISIDE KGGMNRTNPS LVEPFYWEGN RYALTSLSAN ILTIGGQRIE LPEGKYARPK QFRIRGINYV SVNEQNTKKA YLYDEKGKLL KDFPVESVSP IAIDVDLDKS IWIVTEKSPT ELVLYTMRQL AN
|
| |