| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1323 |
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| Symbol | |
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| ID | 8367754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1535345 |
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| End bp | 1536793 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983750 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_003141430 |
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| Protein GI | 256820151 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0560356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAG AAATAGACGA AAGTAAGCAA GGGCAAAGCC TTGTTTTACA AGCTGATAAT
AACAATTCCA AAAAACTATA TATCGAGAGT TACGGTTGCC AAATGAACTT CTCCGACAGT
GAAATTGTAG CTTCTATTCT CTCCAAAGCG GGATATAATA CCACTGATAC TGTTGATGAA
GCCGATTTGG TACTTATCAA CACCTGCTCA GTGCGCGAAA AGGCAGAACA GACCATTCGC
AAGCGTTTGG AGCAATTCAA TGTGTACAAA CGTAAGAAAC CCGCTATGAA AGTGGGCGTA
TTGGGCTGTA TGGCCGAAAG GGTAAAACAC GCCTTCCTCG AAGAAGAAAA AATAGTGGAT
ATGGTGGTAG GTCCTGATGC TTATAAGGAT TTACCTAACC TACTTGAAGA AGTGGAAGAA
GGTCGTGAAG CGGTAAATGT GATTCTCTCT AAGGACGAAA CCTATGCCGA TATTGCACCT
ATTCGTCTCA ATAGCAACGG TGTAACAGCT TTTGTATCGA TTACGCGCGG TTGTGACAAT
ATGTGTACTT TCTGCATTGT ACCTTTCACT CGCGGACGTG AACGCAGTCG TGACCCTTAT
TCTATCCTCA ACGAAATCGC CGACCTCCAA GCGCGTGGTT TCAAAGAGGT TACCCTACTG
GGGCAGAATG TGGATAGTTA CCTTTGGTAT GGAGGCGGGC TCAAAAAGGA TTTCAGCAAA
GCAAGTGAGA TGCAACAAGC CACCGCTATC AACTTCGCTA AACTCCTCGA TATGGTGGCA
ATAGCTCAGC CTGAAATGCG TATCCGCTTT TCTACTTCCA ATCCGCAGGA TATGACCCTT
GATGTGATTG ATACGATGGC AAAACACCCT AACATCTGCA AGTATATCCA CCTGCCCGTA
CAGAGCGGTA GCAATCGCAT CTTGAAAGCA ATGAACCGCC TCCATACTCG CGAAGAATAT
TTTGCGCTGA TAGACAGCAT ACGCGAACGC ATTCCTGAGT GTGCTATTTC GCAGGATATG
ATTGCTGGTT TCCCCACCGA AACTGAAGAA GACCACCAAG ATACGCTTTC GCTAATGGAA
TATGTAAAGT ATGATTTTGG GTTTATGTTT GCTTATTCGG AGCGTCCTGG TACATTAGCA
GCACGCAAAA TAGAAGATGA TGTACCCGAA GAAGTAAAGA AACGCCGTCT TGCTGAGATT
ATCGACCTGC AACAAAAACA CAGCTTGTAC CGCACTCAAG CACAAATAGG CAAAACGGTA
GAAGTGCTCA TAGAGGGAAA CTCTAAAAAA TCGGATAAAG AGTGGATGGG ACGCAATAGT
CAGAATACCG TAGTTGTATT CCCCAAAGAA GATTATAAAA TAGGCGATTT TGTAATGGTA
AAAATTACAG ATTGTACTTC TACTACCCTA ATAGGGAAAG CAGTGAAAAT TAGTAATGAA
AGACAATAG
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| Protein sequence | MAKEIDESKQ GQSLVLQADN NNSKKLYIES YGCQMNFSDS EIVASILSKA GYNTTDTVDE
ADLVLINTCS VREKAEQTIR KRLEQFNVYK RKKPAMKVGV LGCMAERVKH AFLEEEKIVD
MVVGPDAYKD LPNLLEEVEE GREAVNVILS KDETYADIAP IRLNSNGVTA FVSITRGCDN
MCTFCIVPFT RGRERSRDPY SILNEIADLQ ARGFKEVTLL GQNVDSYLWY GGGLKKDFSK
ASEMQQATAI NFAKLLDMVA IAQPEMRIRF STSNPQDMTL DVIDTMAKHP NICKYIHLPV
QSGSNRILKA MNRLHTREEY FALIDSIRER IPECAISQDM IAGFPTETEE DHQDTLSLME
YVKYDFGFMF AYSERPGTLA ARKIEDDVPE EVKKRRLAEI IDLQQKHSLY RTQAQIGKTV
EVLIEGNSKK SDKEWMGRNS QNTVVVFPKE DYKIGDFVMV KITDCTSTTL IGKAVKISNE
RQ
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