Gene Coch_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1315 
Symbol 
ID8367746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1529128 
End bp1529787 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content42% 
IMG OID644983742 
Producthypothetical protein 
Protein accessionYP_003141422 
Protein GI256820143 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTT CTTTTCTTAC AGACCTCGCT AAAAACAATA ATAAAGAGTG GTTCGATGCT 
CATAAGGAGG CTTATGAATG TGCTAAATTA GAAGCTACAT TGCTTTTCAA TTATATTTAT 
ACTGGGCTTG CTGAGCACGA CACCCTTGCG CCACTGAAAA TATACCGCAT CTATCGCGAT 
TTGCGCTTTT CTAAAGACAA AACACCTTAC AAGACGCACT TCGGTTGCTA TATACAACGC 
AAACAACCGC ACTACCGCGG TGGGTATTAC GTGCATATTA GTCCGCAAGA GACGTTTATA 
GGGGGAGGTT TTTTCGACCC TAACAAAGAA GATTTATTGC GTATGCGTCA GGAAATTTCT 
CTCAATGCTG AGGATTTCCA AAAGGTGATG AATAGTGAGG GGATAAAGAA AGAGTTTGAC 
GGGAAACTAT GGGGTGACGA GGTGAAGACT GCCCCCAAAG GTTTTAAGAA AGACGACCCG 
ATGATTGCCT ATTTGCGCAA AAAGCAGTTT CTCTTAAAAC ACGACTATAC ACGACAAGAA 
GCCACAGCGA AGGACTTTGA TAAGAAAGTA GTGCAGGGAC TTTTGGCAAT GCGTCCGTTT 
TTAGACTTTA TGACAGAAGC TTTGACGACG GATTTGAATG GAGAAGCGCT TTTTGGGTAA
 
Protein sequence
MIFSFLTDLA KNNNKEWFDA HKEAYECAKL EATLLFNYIY TGLAEHDTLA PLKIYRIYRD 
LRFSKDKTPY KTHFGCYIQR KQPHYRGGYY VHISPQETFI GGGFFDPNKE DLLRMRQEIS 
LNAEDFQKVM NSEGIKKEFD GKLWGDEVKT APKGFKKDDP MIAYLRKKQF LLKHDYTRQE 
ATAKDFDKKV VQGLLAMRPF LDFMTEALTT DLNGEALFG