| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1303 |
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| Symbol | |
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| ID | 8367733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1514175 |
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| End bp | 1514951 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644983730 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003141410 |
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| Protein GI | 256820131 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT TAAACAACAA GAATGCCGTG ATTACCGGCG GAAGTGAAGG TATTGGCTTA
GGAATAGCCA AAGCCTTTGC CCGTGAGGGC GCGAACCTAT TGCTCATAGG TAAAGACTCT
GAGAAACTAC AAAGAGCCCA ACAAGAGCTA CTAAATGAGT TTGGCGTGCA AGTACACACC
CTCTCTGCTG ATTTATCAAA AACGGAGACA GTAACTGAGG TAGTGAAAGA CATTGAGCGA
CTGCTGCCTA CGGTAGATAT TTTAGTAAAC AACGCTGGTT TGGGCAAGTT CGTGCCTTTT
GAGCAAGTGG ACAATACCTT ATACGATGCC CTCTTCAACC TCAATGTAAA AGCGCCTTAT
TTCCTTACCC AAGGTCTGTT ACCTGCTTTC GTGAAAAGCA AGGGGAATGT TATTAATATC
TCGTCGTGTT TTGCGCACCG AATGCTTCCT AACCGCGCAA CTACCGCTTA TTCAGCTACT
AAAGGAGCTT TGGACTCTTT TACCAAGGCG TTGGCTTTTG AAGTGGGACA TTTGGGCGTA
CGCGTAAATG CCATTGCCCC TGGGAATATT TCTACACCGC AATTCAACCG CAATTTGCAA
GCTCTCACCC CCGAAAAACA AGCCGCTTTT GAGACTATGG TAAAGGAAGT TTACCCTTTA
CAACACATTG GCACGCCTGA AGATATAGCC GAGGCTTGTG TATTCTTAGC CAGCGACAAT
GCTTCGTGGA TTACAGGCAC TGTGCTTGCT GTAGATGGCG GACTCACTAC AAATTAG
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| Protein sequence | MKNLNNKNAV ITGGSEGIGL GIAKAFAREG ANLLLIGKDS EKLQRAQQEL LNEFGVQVHT
LSADLSKTET VTEVVKDIER LLPTVDILVN NAGLGKFVPF EQVDNTLYDA LFNLNVKAPY
FLTQGLLPAF VKSKGNVINI SSCFAHRMLP NRATTAYSAT KGALDSFTKA LAFEVGHLGV
RVNAIAPGNI STPQFNRNLQ ALTPEKQAAF ETMVKEVYPL QHIGTPEDIA EACVFLASDN
ASWITGTVLA VDGGLTTN
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