Gene Coch_1298 details

Gene Information

• Locus tag: Coch_1298
• ID: 8367728
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1510945
• End bp: 1511367
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 644983726
• Product: OsmC family protein
• Protein accession: YP_003141406
• Protein GI: 256820127
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1764] Predicted redox protein, regulator of disulfide bond formation
• TIGRFAM ID: [TIGR03561] peroxiredoxin, Ohr subfamily

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.345138
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCAA TGTACACAGC AGTGGCCACC GCAACAGGTG GTCGCAACAG AAAAGTAACT 
TCTGACAATG GCGTATTAAG CCTAGAAATA CGTTCTCCTA AAGCCTTAGG CGGAGCTAAC 
GACGATTATA CCAATCCTGA GCAGATTTTT GCCGCTGGCT ATGCTGCTTG TTTCGACAGC 
GCACTGAATT TGGTTATTAG ACAAACTAAA ATAACCACTG GTGAGACCGC TGTAACAGCA 
CACGTATCTA TTGGAAAGCT GAACAACGGC GGTTTTATTT TCGGCGTAAC CTTACAAGTG 
AATATACCTA ATGTGTCGCT TGAACAAGCT AAGGAACTTG TAGCAAAAGC CGACCAAGTT 
TGTCCGTATT CTAACTCTAC TCGTGGGAAT ATAGAAGTAA CCTTTGAAGT AAGTAATAAT 
TAG 

 

Protein sequence

MTAMYTAVAT ATGGRNRKVT SDNGVLSLEI RSPKALGGAN DDYTNPEQIF AAGYAACFDS 
ALNLVIRQTK ITTGETAVTA HVSIGKLNNG GFIFGVTLQV NIPNVSLEQA KELVAKADQV 
CPYSNSTRGN IEVTFEVSNN