Gene Coch_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1231 
Symbol 
ID8367660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1438367 
End bp1439209 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content44% 
IMG OID644983661 
ProductIntegral membrane protein TerC 
Protein accessionYP_003141342 
Protein GI256820063 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTC TTTTTACTGC TGATGCCCTT GTGGCGCTTA TTACTCTTAC GTTTCTCGAA 
ATTGTATTGG GGATTGATAA CGTGATATTT ATCTCTATCG TTACGGGTAA ACTGCCCGAA
CATCAACGTA AGCGCGCTAC ACGCTTAGGG CTTTTTTTGG CGATGTTTTT GCGCATTGCT
CTTTTATTGG GTATTTCGTT TCTGATTAGG TTGAAAGACC CGCTTATCAG CCTTGACTGG
GGGTGGTTTT CAGCTCATTT TAACGGGCAG GCTCTCATAC TGCTTGCGGG GGGTATCTTC
CTGCTCTATA AATCGACTAA GGAAATTCAC GCGAAAGTGA ATCATATAGA ACACGTTACA
CAATCGGATA ACCCTAAGGG GCGACAACAC GCTTCTTTCG GGGGAACTAT TGTACAAATA
CTGTTGATAG ACCTTATTTT CTCGATGGAT AGTATTCTTA CGGCGGTGGG AATGACCAGC
GGGCTGACAG GGGCGATTTA TATAATGATT ACAGCGGTAG TGCTTTCGGT GGGCATAATG
ATGCTTTTTG CAAACCCTGT GGGCAACTTT GTAAACCGCA ATCCTTCGAT TCAGATATTG
GCACTTTCGT TCTTGATACT CATTGGTTTT ATGCTTATTA CTGAGAGTAT GCACCTATCG
GAAGCAGTAT TGGCAGGGCA AACGGTGGGC GCTGTGCCTA AGGGATACTT GTACTTTGCG
ATAGCGTTTT CGTTAGGGGT AGAGTTTCTG AATATGAGAA TGAGGAAGGC TTCACCTCCA
GCCTCTCTCC CAAGTACAGG GGAGCAAAGT GAAAAAGAGG GAGAAAAAAT GATGAATGAT
TAG
 
Protein sequence
MDFLFTADAL VALITLTFLE IVLGIDNVIF ISIVTGKLPE HQRKRATRLG LFLAMFLRIA 
LLLGISFLIR LKDPLISLDW GWFSAHFNGQ ALILLAGGIF LLYKSTKEIH AKVNHIEHVT
QSDNPKGRQH ASFGGTIVQI LLIDLIFSMD SILTAVGMTS GLTGAIYIMI TAVVLSVGIM
MLFANPVGNF VNRNPSIQIL ALSFLILIGF MLITESMHLS EAVLAGQTVG AVPKGYLYFA
IAFSLGVEFL NMRMRKASPP ASLPSTGEQS EKEGEKMMND