| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1215 |
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| Symbol | |
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| ID | 8367643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1421751 |
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| End bp | 1422035 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 644983644 |
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| Product | virulence-associated protein D (VapD) conserved region |
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| Protein accession | YP_003141326 |
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| Protein GI | 256820047 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3309] Uncharacterized virulence-associated protein D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCTA TAGCTTTTGA CTTAATAGTT TCTGAGCTAA AGAAACATTA TAAAGATCCA
TATCACAACG CTTATGCTGA AATTAGAAAA GTACTTAAGC AAAATAATTT TTATTGGATA
CAAGGGAGTA CTTATGCTAC TGAAGGCGAT TTGCGAACCC TTTTTCGTGC TATACAAAGC
CTAAAAAATA TCAAATGGTT CTGCCTCTCA GTGAGAGATA TTCGCGCTTT CAAAATAGAA
GACTACTCCG ATTTCACTCA AGAATTTCAA CTAAATATCA ATTAA
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| Protein sequence | MHAIAFDLIV SELKKHYKDP YHNAYAEIRK VLKQNNFYWI QGSTYATEGD LRTLFRAIQS
LKNIKWFCLS VRDIRAFKIE DYSDFTQEFQ LNIN
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