9 homologs were found in PanDaTox collection
for query gene Coch_1209 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_1209  virulence-associated protein D (VapD) conserved region  100 
 
 
101 aa  208  2e-53  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4994  virulence-associated protein D (VapD) region  54.95 
 
 
92 aa  106  1e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1215  virulence-associated protein D (VapD) conserved region  54.35 
 
 
94 aa  100  7e-21  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0880  virulence-associated protein D (VapD) conserved region  51.61 
 
 
95 aa  98.6  3e-20  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_007514  Cag_1570  virulence-associated protein D  43.48 
 
 
92 aa  94.4  5e-19  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4342  virulence-associated protein D (VapD) conserved region  42.86 
 
 
92 aa  86.7  1e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.530392  normal 
 
 
-
 
NC_007925  RPC_2389  virulence-associated protein D  40.86 
 
 
108 aa  68.6  0.00000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.337272 
 
 
-
 
NC_012912  Dd1591_0037  virulence-associated protein D (VapD) conserved region  40.86 
 
 
93 aa  66.6  0.0000000001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011025  MARTH_orf081  virulence-associated protein D  30.85 
 
 
126 aa  50.4  0.000007  Mycoplasma arthritidis 158L3-1  Bacteria  normal  0.0453491  n/a   
 
 
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