| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1109 |
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| Symbol | |
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| ID | 8367531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1311123 |
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| End bp | 1312148 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983537 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_003141225 |
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| Protein GI | 256819946 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATAA AAAATAAAAC TCTTCTTATC ACAGGAGGAA CAGGCTCTTT TGGGAATGCT
GTATTACAGC GTTTCCTCCC TACCGATCAC TTCAAAGAAA TACGCATTTT TTCACGCGAT
GAAAAAAAAC AGGACGATAT GCGCCACGCC TTGCAAAACC CTAAAGTGAA ATTCTATATA
GGCGATGTAC GCGATAGAGC CTCTGTAGAT ATAGCTATGT CCGGAGTAGA TTATGTGTTC
CACGCTGCTG CCCTTAAACA AGTGCCTTCT TGTGAGTTTT TCCCTTTAGA AGCTGTCAAA
ACTAATGTGT TAGGCACAGA AAATGTACTC AACTCAGCTA TCGCCTATCA AGTGAAAAAT
GTAGTTGTAC TTTCTACCGA TAAGGCTTGC TACCCTATCA ATGCAATGGG TATTTCCAAG
GCAATGATGG AAAAAGTAGC TATTGCTAAA GGTCGTCAGT TAGGAGAAAA TGCTGTAACA
ACCATTTCCT GTACTCGATA TGGCAATGTA ATGGCTTCTC GAGGATCAGT TATTCCACTA
TGGATAGAAC AAATGAAAGA CAATAAAGTC ATCACCCTAA CCGACCCCAA TATGACTCGC
TTTATGATGA CTTTAGCCGA TGCTGTAGAC CTCGTCCTAT ATGCTTTCGA AAATGGACAT
AACGGCGACC TCTTCGTGCA AAAAGCCCCT GCTGCTACAC TTACCGTATT AGCCGAAGCG
CTCAAACAAC TCTACAAAAA AGATACTGAA GTGAAGATTA TAGGTACTCG CCACGGCGAA
AAATTGTATG AAACCTTAGT AGCTCGTGAA GAAATGGCTC GCGCTGAAGA TATGGGTAAC
TATTTCCGCA TTCCGTGTGA TACTCGCGAC TTAAATTACG ATAAGTATTT CAAAGATGGG
CAAGAAAAAG TGTCCCTCAT CGAAGATTAC CACTCTCATA ATACTACCCA TTTAAGCGTA
GAGGAGATGA AATCTCTATT GCTAAAATTG GAAGAAATAC AAAACGATAT ACAATGTTTG
AAGTAA
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| Protein sequence | MEIKNKTLLI TGGTGSFGNA VLQRFLPTDH FKEIRIFSRD EKKQDDMRHA LQNPKVKFYI
GDVRDRASVD IAMSGVDYVF HAAALKQVPS CEFFPLEAVK TNVLGTENVL NSAIAYQVKN
VVVLSTDKAC YPINAMGISK AMMEKVAIAK GRQLGENAVT TISCTRYGNV MASRGSVIPL
WIEQMKDNKV ITLTDPNMTR FMMTLADAVD LVLYAFENGH NGDLFVQKAP AATLTVLAEA
LKQLYKKDTE VKIIGTRHGE KLYETLVARE EMARAEDMGN YFRIPCDTRD LNYDKYFKDG
QEKVSLIEDY HSHNTTHLSV EEMKSLLLKL EEIQNDIQCL K
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