Gene Coch_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1102 
Symbol 
ID8367524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1303172 
End bp1304386 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content41% 
IMG OID644983530 
Producthypothetical protein 
Protein accessionYP_003141218 
Protein GI256819939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAT ATCCCTTCGC TATTCTCGTA GCGTGCTTAT CCCTTATCAT AGGGCTGATA 
CTACAACTTA CCTTAGGAAG TATCAGCAAA AGCTGGTTTA GCTTTCCTTA CAATGTAATA
GGAGGCTTTG CCTTTGTAGT ACTCACTACA GCTGTATATT TTATTTTTAG AAAAACGAAT
TTCATCGTGC GCTTTTCATC AGCGCCTTTT GCTATTGTTA CGGTCGTAAC CCTTGGGGTA
CTCACCATTG GTTTGGGGAG CATCAACGTA AATCCTCAAG AGGTAGCTCA TAGCTTTGTG
GGCAAATTAG GCTTAGACGA CCTTACCAAA ACTTGGTACT TTGGCATTAT CTTCGTATTG
GCACTGATGA ACCTTTGGTT TTCTATCCTC AAACGCTCGA TGGTCTACCA ACGTAAAAAC
ATACCTTTCC TCCTCAACCA CTTTGGCTTA TGGCTTACAA TGTTCGCTGG CGTATTAGGT
CAGGGAGATA TTATACGTCT GAAAATGAAC CTCTATAAGG ATAAGCTCGA ATGGCGTGCA
ACTACTGAAG ATAATCAAAT GGTAGAACTC CCCATTGCAA TGGAACTCAA AGAGTTCAGT
ATTGATATTT ATCCTAACAA ACTATTTGTG ATTGATAGTA CAGGTTCAGC ACTACCTCAC
GAAAAACCTC AAGGCTTTAT GCTGGAGAAA GAAGGTGACT ATGCAACCCT GCTGAACTGG
AAAATCACCC TTCACCAATA TCTTGAAAAA GCTATTCCCG ATACCGATAG TACCTACATC
AATCATACGA TGTGGGGTGC GACCAATGCG GCTAAGGTAA CCGTAGAAGA CCTTCGTACT
CATAAAAAGA AAACCGATTG GATTTCTGCA GGTAACTTCC AATTCTCACC CCGTGCCATT
CATTTAGACG ATGAACATAC CTTAGTAATG GCTCCTGCCG AAGCACGTAA ATTCCAATCT
GAGGTATTAG TATACCAAAA AGGGAAACAA GAAGTTTTAG AAGAAAAAAT AGAGGTGAAT
CACCCTATTA GTGTAGGTGG TTGGCGTATT TACCAATTGA GTTATGACGA GCGTATGGGA
CGTTGGTCAG AACTTAGTGT CGTCGAACTC ATCTCCGACC CTTGGTTACC TGTCGTTTAT
GTAGGAATTT TCTTACTACT TGCTGGCGGT ATTGCCCTAC TCTTTGAAGT AAAAACTAAA
ACAGCTAACA AGTAA
 
Protein sequence
MKQYPFAILV ACLSLIIGLI LQLTLGSISK SWFSFPYNVI GGFAFVVLTT AVYFIFRKTN 
FIVRFSSAPF AIVTVVTLGV LTIGLGSINV NPQEVAHSFV GKLGLDDLTK TWYFGIIFVL
ALMNLWFSIL KRSMVYQRKN IPFLLNHFGL WLTMFAGVLG QGDIIRLKMN LYKDKLEWRA
TTEDNQMVEL PIAMELKEFS IDIYPNKLFV IDSTGSALPH EKPQGFMLEK EGDYATLLNW
KITLHQYLEK AIPDTDSTYI NHTMWGATNA AKVTVEDLRT HKKKTDWISA GNFQFSPRAI
HLDDEHTLVM APAEARKFQS EVLVYQKGKQ EVLEEKIEVN HPISVGGWRI YQLSYDERMG
RWSELSVVEL ISDPWLPVVY VGIFLLLAGG IALLFEVKTK TANK