| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0950 |
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| Symbol | |
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| ID | 8367369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1107290 |
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| End bp | 1108576 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983375 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_003141066 |
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| Protein GI | 256819787 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAA AGAAATTCAT TACAATTCTA ACAGCAGGTT TTGCTCTATT TGCGATGTTT
TTTGGGGCGG GCAATTTGGT TATTCCCCCT TATATAGGCT TAAAAATAGG AGCTTTAAGT
GGCGTGGCTT TTGCAGGTTT TTTTGTGTCG GACATACTAC TGTCGTTCTT AGCGGTGGTA
ATGGTAGCCT CTGTAGGACT TACTTTCACC GATTTAGGCA AGCGCTTCCC TCCGTTATTC
GTAAATGCGC TTGTGTTTTT AATCATTGTT ACCTTAGGTC CTCTTATCTG TGTACCGCGT
ACGGGGTCTA CAACCTACGA GGTGGCAGTA CAGCCTTTCT TCCCTCAAAT AGGCAAAATT
ACTTTTGGGG TGCTGTACTT TGGCATCACG CTTTTGCTCT CTATCTCGAA AGCCAAAATA
GTAGACATCA TCGGTAAAAT ACTCACGCCT TTTCTTATCC TTTCACTTAC TATCCTGATA
GTCGTGGGCA CCATCAATGC GCCTAAGGAA TTGGTAGACA ACGGTTATAG CTTTGGAGAG
GCGTTTGCGT TTGGCTTTTC AAAAGGCTAC TTAACCTTAG ATGTGCTTGC GGGGGTTATT
TTTTCGGGGC TCATTATCTC GTCAATCGTC CAAGAGGGCT ACCGCAGTGA AGCTGATAAA
AAACAAGTAA CAATACTCTC TGGGGTCATA GCCGCTGGCT GTTTGGTGTT TATCTACGGA
GGATTGCTAT ATCTGGGAGC TACCTCTAAT CTTTCTTCTT CCGAAGGGAT TAGCTATATA
GATATTCTCA AGCATATAGC TTATAACGTA TTAGGCGATA ATGGTGGTAT TGTAATATCG
GTAGCGGTAG CTTTTGCTTG CCTTACTTCG GCTATTGCTA TTGTATCGGC TATGGGTGAG
ATTTTCGAGA ACATCAGCAA AGGGCGTATC CCTTATAAAT GGGGAGTGTG GATTTGTACC
TTAGTATCGT TTGCGCTTTC TATCAGAAGT GTAGATGAAA TTATTCATTA CGCTGGCTAT
CTGTTAGATT TCTCATATCC TATCACCATC GCACTTACCT TATTTGTGCT TTTCTTTGGC
AAACGGGTGC AGAGCAATGC TCCTTATATA GTGGGGGTAA CGCTCACGGC TATATTATCA
GGACTTTTCA TCATAGGTGA TTTGCTACAT ATAGCGTGGA TTAATAACTT CAAAGCGTTA
TTACCCTTGG CTGACTACCG AATAGAGTGG TTTATTCCTG CTTTTCTATC ATTTATCATA
ACGGCAATAA TAGTGAAGAG AGTATAG
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| Protein sequence | MDKKKFITIL TAGFALFAMF FGAGNLVIPP YIGLKIGALS GVAFAGFFVS DILLSFLAVV
MVASVGLTFT DLGKRFPPLF VNALVFLIIV TLGPLICVPR TGSTTYEVAV QPFFPQIGKI
TFGVLYFGIT LLLSISKAKI VDIIGKILTP FLILSLTILI VVGTINAPKE LVDNGYSFGE
AFAFGFSKGY LTLDVLAGVI FSGLIISSIV QEGYRSEADK KQVTILSGVI AAGCLVFIYG
GLLYLGATSN LSSSEGISYI DILKHIAYNV LGDNGGIVIS VAVAFACLTS AIAIVSAMGE
IFENISKGRI PYKWGVWICT LVSFALSIRS VDEIIHYAGY LLDFSYPITI ALTLFVLFFG
KRVQSNAPYI VGVTLTAILS GLFIIGDLLH IAWINNFKAL LPLADYRIEW FIPAFLSFII
TAIIVKRV
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