Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0936 |
Symbol | |
ID | 8367355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1090033 |
End bp | 1090932 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644983361 |
Product | conserved hypothetical protein, secreted |
Protein accession | YP_003141052 |
Protein GI | 256819773 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0362607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAC TTTTATTTTC AACTTTACTA TTGTCTTCAG TAGCTGTATT TGCTCAGGAA GACCAAACGA ATGACGGTGT AGCACAAGAC CCTACGGCAG CTCCAACAGA GGAAGCTCCT GCTCCTCGAT GGACAAAGGG AGGTAACGCT TCACTGATGT TCTCGCAAGC CGCCTTCAAC CACGATTGGA CAGGAGGGGG AACTAACAAC GTAGCAGCAA GCCTTGCGGT GAGCTATGCT TTTAACTACA AGAAAGACAA ATGGGCGTGG GATAACAACG TATTTGTTGA TTACGGGATT ACTAAACTTG AAGGTGATGA CTATTCAAGA AAAACTACTG ACCGTTTTGA GGTGAACTCA GTACTCGGTT ACCAATTGAA CAACCCTCAG TGGTACTATT CATTCTTCTT GAACTTCAAA ACACAAATGA CCGATGGTTA CAAATATGAG AGCACAGGTC GTACGCTCAT AAACCAAATG CTTTCACCTG GATACTTACA ATTTGGTCCT GGTATGTTGT GGAAGAAGAG CGATAACCTA AAAGTGAACT TGGCTCCTGC AACTTCTAAA ATCACGACTG CTAAAAGCCG TTGGACAGAA ACAGGTCCTT TCTACGGTGT TGAACAAGGA AAGAACATTC GTTATGAACT CGGTTTCTAC TTGAACGGTT ATGCTAAGTT TACTGTAATG GACAATGTGT CTTTCGAGAA TATCCTCAGC TTGTACAGCA ACTATCTCGA CAAACCACAA AACGTAGACT TGGATTATAC TGCAAACATT GTGATGACTA TCAACAAGTA CTTATCAGCT AACTTTACTT TCCAAGCTAT CTACGACGAC GCTGCTAAAG CCTTCCAAAT TCGTGAAGTA TTGGGCTTAG GAGTAAACTA CAAGTTTTAG
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Protein sequence | MKRLLFSTLL LSSVAVFAQE DQTNDGVAQD PTAAPTEEAP APRWTKGGNA SLMFSQAAFN HDWTGGGTNN VAASLAVSYA FNYKKDKWAW DNNVFVDYGI TKLEGDDYSR KTTDRFEVNS VLGYQLNNPQ WYYSFFLNFK TQMTDGYKYE STGRTLINQM LSPGYLQFGP GMLWKKSDNL KVNLAPATSK ITTAKSRWTE TGPFYGVEQG KNIRYELGFY LNGYAKFTVM DNVSFENILS LYSNYLDKPQ NVDLDYTANI VMTINKYLSA NFTFQAIYDD AAKAFQIREV LGLGVNYKF
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