| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0913 |
|---|
| Symbol | |
|---|
| ID | 8367332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1064507 |
|---|
| End bp | 1065244 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644983338 |
|---|
| Product | filamentation induced by cAMP protein Fic |
|---|
| Protein accession | YP_003141029 |
|---|
| Protein GI | 256819750 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.876617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACA TCTTTACAAC AAAACAGCAA GCGTTGGCAG CTCGTATTTT GGAGCATAAT
CATTTTTCAC CCCTAAGTGA CTTATATTCT TCGGAAATAC AAGACTTGGC GGTGATATGG
TCGTTTTACT CTGGGAAGAT AGAAGGTAAT ACTTATACTT TTGTAGAGAC GGAAACGCTC
TTAAAAGATG GTATTACTTC ACCCAGACGC TATGAAGAGG CTAAAATGCT CAAAAACCTT
TACAACACTT TTATTTCGGA AGTAGAGTAT ATCAAAAAAG GGAATACCGA AGAGATTAAC
AAACGATTGC TTTTTGAGCT ACACTCTCGC TTGATTGCTG ATTTGATAGA TAACCGCGAG
AGGGGTATTA TCCGCAAACG CGCTGTGCGG ATTACTGGAA CGGATTATAC ACCTCCTACT
GGGGAGCACC TTATTGAAAA AGCCTTAGAC CAGATAATGG AGGAACAGGC TGAAATAGAA
AATCCTTTAG AGAAAGCGGT GTTTTTGCAT TGCAATATTG CGCGCTTGCA ACCTTTTATT
GACGGCAATA AGCGCACTTC GCGCTTGGTT GAGAGTATTG TGCTGATGAA TGACGATATC
GTACCGATTC ACACGACTCG CTTAGAGGAT ATCAATACGT ACCGTAAGGC TTTGCTTTCT
TTTTATGAAA CGAGTGATTA CAGTGAATAT GCCGATTATT TTCTACAAAA GAAATGGGAG
TATCTGCAGA AGTCGTAG
|
|---|
| Protein sequence | MKHIFTTKQQ ALAARILEHN HFSPLSDLYS SEIQDLAVIW SFYSGKIEGN TYTFVETETL
LKDGITSPRR YEEAKMLKNL YNTFISEVEY IKKGNTEEIN KRLLFELHSR LIADLIDNRE
RGIIRKRAVR ITGTDYTPPT GEHLIEKALD QIMEEQAEIE NPLEKAVFLH CNIARLQPFI
DGNKRTSRLV ESIVLMNDDI VPIHTTRLED INTYRKALLS FYETSDYSEY ADYFLQKKWE
YLQKS
|
|---|
| |