Gene Coch_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0885 
Symbol 
ID8367304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1041552 
End bp1041950 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content37% 
IMG OID644983310 
Productputative prophage Lp2 protein 26 
Protein accessionYP_003141001 
Protein GI256819722 
COG category 
COG ID 
TIGRFAM ID[TIGR01671] phage uncharacterized protein TIGR01671 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAA TAAAATTTAG AGGATTTACG GACTGCTTAG TTCAAGATAA ATGGGTTTAT 
GGCTTTTTAA GTGAAGAAAA TAAAATAAGG AAAACAACAA GCCTTATTGA CTATGAAGTA
GATAAAGCAT CTATTGGACA GTTTACAGGA CTGTATGACA AAAACGGCAC TGAAATCTAT
GAGGGCGACA TTCTTGCCCA CGATTATGGA GATTACAGCC TTATTGTGTA CCGAGAGGAA
TGTATGGCAT TCTGTCGTGT CGATGCCAAA GATGTAGGCA ACATTAATGG GTATTTCAAC
CTTTCTGAAC ACGCTTGGCG TTCGTGTTTG CAACGTGCAG AAGTTATTGG AAACCAATAT
GAAAACCCCG AATTGTTAAA TTATAAAGAA GAAGATTAA
 
Protein sequence
MRTIKFRGFT DCLVQDKWVY GFLSEENKIR KTTSLIDYEV DKASIGQFTG LYDKNGTEIY 
EGDILAHDYG DYSLIVYREE CMAFCRVDAK DVGNINGYFN LSEHAWRSCL QRAEVIGNQY
ENPELLNYKE ED