Gene Coch_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0819 
Symbolpgi 
ID8367237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp981364 
End bp982983 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content44% 
IMG OID644983245 
Productglucose-6-phosphate isomerase 
Protein accessionYP_003140936 
Protein GI256819657 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA ACAGTAATCC AACACAAACC AATGCGTGGA AAGCATTGCA AAAACATTTT 
GCGGAAGTAA AAGACCGCCA TATGCTTTCT CTATTTGAGA AAGACCCCAC TCGCGCGGAG
AAATTCGCCA TCAAATGGCA CGACTTCTAT GTAGATTATT CTAAAAACCG CATAGACGAA
GAAACTCTTA AACTCCTTGT GCAACTCGCC GAGGAATGTG GTTTAAAGGA CGCTATTGGC
AAATACTTCG GTGGCGACCT TATCAACAAC ACCGAAAAAC GCGCGGTTTT GCACACTGCC
CTTCGCGCGC CCGAAAACAG CGTGATAAAC GTAGATGGGA AGAATGTAAT GCCCGAAGTA
GCGGCTGTAA AACATAAAAT CAAACAGTTC AGCGAAGAAG TCATCAGTGG CAAACGCAAA
GGCTATACTG GTAAAGCCTT TACCGATGTG GTGAATATTG GTATTGGTGG GTCTGACTTA
GGTCCGGCAA TGGTAACTGA GGCGCTTAAA TTCTATAAGA ATCACCTCAA CGTACACTTC
ATCAGCAATG TAGATGGTGA CCACGTGCTT GAAACTATTA AGCACCTTAA CCCAGAAACT
ACTTTGATAG TGATTGTATC TAAGACTTTT ACCACATTGG AAACCCTTTC TAATGCACTT
ACTGTAAAAG AATGGTTCCT GAAATCGGGT TCAGAAAAAG ATATTGCTAA ACACTTTGTA
GCGGTATCGA CTAACTTGCA AGAAATCGAT AAATTCGGTA TCGACCCTGA TAACGTATTC
CCTATGTGGG ACTGGGTAGG TGGACGCTTT TCGTTGTGGA GTGCCGTAGG TCTCAGCATT
GCCCTATCAG TAGGTTATGA CAATTTTGAT AAGTTGCTCA AAGGGGCTCA CGCTATGGAC
GAGCATTTCC GCACTGCTCC TTTTGAGAAG AATATTCCGG TAGTCTTGGC ATTGCTAAGT
GTGTGGTACA ACAACTTCTA CGGAGCCGAA AGTCAAGCGA TCATTCCTTA TACTCAGTAT
TTGCACCGCT TGGCGGCGTA CCTACAACAA GGTATAATGG AAAGTAACGG TAAACAAACC
GATCGTGATG GCAATCCTAT CCCTTATCAA ACTGGAGTAA TTATCTGGGG TGAACCAGGA
ACCAACTCTC AACACGCGTT CTTCCAGCTC ATCCACCAAG GTACTAAATT GATACCTACT
GATTTCATTG GCTTTAAACA CTCATTGCAC GGCAATACCG ACCACCACAA CAAGCTAATG
GCTAACTTCT TTGCACAAAC CGAAGCCCTC CTCAAAGGTA AAACCGAAGC CGAAGTACGC
AAAGAAATGG GTGACAAGGT AAACGAAGCT TTAGTACCTT TCAAAGTGTT TACAGGGAAC
CGCCCTACAA CCTCTATCCT CATCGATAAA CTCACCCCTG AAAGTTTGGG TAGTCTTATC
GCAATGTATG AGCACAAGAT ATTTGTAGAA GGTGTGATTT GGAACATCTA CAGCTATGAC
CAATGGGGCG TAGAGCTCGG CAAACAGTTG GCAAGCAAAA TCCTTAAAGA CATCGCCGCT
ACCGAACTTT CTGCTCACGA CAGCTCTACA ACCAATTTAC TAAAACAATT CAAAAAATAG
 
Protein sequence
MLKNSNPTQT NAWKALQKHF AEVKDRHMLS LFEKDPTRAE KFAIKWHDFY VDYSKNRIDE 
ETLKLLVQLA EECGLKDAIG KYFGGDLINN TEKRAVLHTA LRAPENSVIN VDGKNVMPEV
AAVKHKIKQF SEEVISGKRK GYTGKAFTDV VNIGIGGSDL GPAMVTEALK FYKNHLNVHF
ISNVDGDHVL ETIKHLNPET TLIVIVSKTF TTLETLSNAL TVKEWFLKSG SEKDIAKHFV
AVSTNLQEID KFGIDPDNVF PMWDWVGGRF SLWSAVGLSI ALSVGYDNFD KLLKGAHAMD
EHFRTAPFEK NIPVVLALLS VWYNNFYGAE SQAIIPYTQY LHRLAAYLQQ GIMESNGKQT
DRDGNPIPYQ TGVIIWGEPG TNSQHAFFQL IHQGTKLIPT DFIGFKHSLH GNTDHHNKLM
ANFFAQTEAL LKGKTEAEVR KEMGDKVNEA LVPFKVFTGN RPTTSILIDK LTPESLGSLI
AMYEHKIFVE GVIWNIYSYD QWGVELGKQL ASKILKDIAA TELSAHDSST TNLLKQFKK