| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0728 |
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| Symbol | |
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| ID | 8367145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 883877 |
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| End bp | 884611 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644983154 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_003140846 |
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| Protein GI | 256819567 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACAAG AATCCCAAAT ATACGGCATT CGTGCCCTGA TAGAAGCTCT CAAAGCAGGT
AAAACCATCG ATAAAGTCTT TTTGCAAAAA GGCTTACAAG GTGTTTTGTT TAGAGAGCTA
ATGCCCTTAT TGCAAGAAGC CCAAGTGCCC GTACAATATG TGCCCGTTGA GAAACTGAAC
CGCCTTACCA AGAAAAACCA CCAAGGGGTA GTCGCTAACC TCTCCCCCGT AGATTATCAC
AATTTTGAGG ATTTGGTAAT CTCAGTTACC GAAAGCGGAG CCACACCGCT TTTCCTCGTG
TTAGACCACC TTTCTGATGT GCGCAACTTT GGTGCGATTA TCCGCACAGC AGAGTGTACA
GGTGTTTCGG GGATTATCAT TCCTAAGCGT GGCAGTGTGA GTATCACCGC CGATACTGTC
AAAACCTCGG CTGGAGCTGT GTTTCGCGTG CCTATCTGCA AGGTCGAAAA CCTTGTAGAT
GCGGTCTACT ACCTGCAAGG CAGTGGCATT AGGGTAGTGG CAGCGACCGA AAAGACTAGT
CAATTGCTAT ACACCGAAGA CTTTACGGTA CCTACCGCTA TTGTTATGGG GGCGGAAGAC
GTCGGGGTAT CGCCAGCAGT ACTCAAAGTA GTAGATAGCA AAGCCAAATT GCCAATGGTA
GGCGATATTA GCTCACTAAA TGTTTCGGTA GCTTGTGCTG TTTTCTTGTA CGAAGCTCTC
AAACAACGAC TCTAA
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| Protein sequence | MQQESQIYGI RALIEALKAG KTIDKVFLQK GLQGVLFREL MPLLQEAQVP VQYVPVEKLN
RLTKKNHQGV VANLSPVDYH NFEDLVISVT ESGATPLFLV LDHLSDVRNF GAIIRTAECT
GVSGIIIPKR GSVSITADTV KTSAGAVFRV PICKVENLVD AVYYLQGSGI RVVAATEKTS
QLLYTEDFTV PTAIVMGAED VGVSPAVLKV VDSKAKLPMV GDISSLNVSV ACAVFLYEAL
KQRL
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