Gene Coch_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0488 
Symbol 
ID8366899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp625915 
End bp626481 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content40% 
IMG OID644982914 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003140612 
Protein GI256819333 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT GGATTGGCTC CTTTGCTCTA TGGCTAATGG GGTGGAAGAT AGAATTACAA 
GGTGATTTGA AAACTTTAAA TCGCTGTGTA TTAGTAGTAG CACCGCACAC TACTAATTGG
GAGTTTGTTT TGGGTATCTT GGCTTATTGG AAGATGGAAA AACCGATTAA ACTCATTATA
AAAGACGCAC ATACCAAAGC GTGGTACGGC TGGTTAGTGC GCAAGTTAGG AGGGATTGGC
ATCAATCGTT CACAGCGCAA TCACTTGATA GAATTTGTTA CTGAACTCTT TAAGAAAGAA
GACTTTAGCT TGGTAGTAAC CCCTGAGGGA ACGCGTTCTA AGGTGAACAA GTGGCGTATG
GGCTTCTACC ATATAGCTCT TTCTGCCCAA GTACCCATAG TTTTAGGTGC TGGTGATTTT
AAGAAGAAAA TGATATATAT CGGGAAGACC ATTAGCATAG AAGACTTACA AACGCTCCCA
CAAGAGCAAA TAATGGAGGA AATACAGAAC TTTTATAAGG ATATTACTCC TAAATACCCC
GAGCAGTGGA ACCCTAAAAT TTATTGA
 
Protein sequence
MKKWIGSFAL WLMGWKIELQ GDLKTLNRCV LVVAPHTTNW EFVLGILAYW KMEKPIKLII 
KDAHTKAWYG WLVRKLGGIG INRSQRNHLI EFVTELFKKE DFSLVVTPEG TRSKVNKWRM
GFYHIALSAQ VPIVLGAGDF KKKMIYIGKT ISIEDLQTLP QEQIMEEIQN FYKDITPKYP
EQWNPKIY