Gene Coch_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0484 
Symbol 
ID8366895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp621535 
End bp622137 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content41% 
IMG OID644982910 
Productnitroreductase 
Protein accessionYP_003140608 
Protein GI256819329 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.055652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTT TAAAATTAGC ACAAACCCGC TATACTACTA AACATTACAG CTCTAAACGT 
GTGAGCGATG AAGATATCGC TAAGCTCAAA GAGATATTAC GCCTCGCTCC TTCGTCTATC 
AATTCACAGC CTTGGCAATT TGTTTTCATA AGTGATGAAG CTACTAAAGA GGCTTTCGCC 
AAAGTATCGC TTACCAACGA AGAACGCGTT AGAAAAGCAA GTCATTTAGT GGTATTTATG 
GCGAATAGCG CTTTGCCATC ATTTGAAGAA AAGCTCGTTA AAGCAGCTAC TGAAATGGGA 
CTTAACTTCT ATCATAAAGT ACAAAAACCC AAAGGTGATG TAGGACTCTA TGCGTGGATA 
AACAACCAAG TGTACATCGC ATTAGGATTT TTTCTCAGTG CTTGTGCTTC TATGGGCATC 
GATAGTACTC CTATGGAAGG TATTGTCAAT ACTGAGTACG ACAAGCTTCT GAATGAACCT 
CAATACACTA CGCTCTTCGC GGTGGCAATA GGCTACCGCG ACCCTGAGGA CAGCAATCAA 
TTGCACTTGC GCCCAAAATC GCGCTTGCCG TTAGAAGAGG TAGTAAAGGA TTTTAAATTA 
TAA
 
Protein sequence
MDFLKLAQTR YTTKHYSSKR VSDEDIAKLK EILRLAPSSI NSQPWQFVFI SDEATKEAFA 
KVSLTNEERV RKASHLVVFM ANSALPSFEE KLVKAATEMG LNFYHKVQKP KGDVGLYAWI 
NNQVYIALGF FLSACASMGI DSTPMEGIVN TEYDKLLNEP QYTTLFAVAI GYRDPEDSNQ 
LHLRPKSRLP LEEVVKDFKL