Gene Coch_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0456 
Symbol 
ID8366862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp584753 
End bp585475 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID644982877 
Productnitroreductase 
Protein accessionYP_003140580 
Protein GI256819301 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAG ATATATTGAA CTTTAGGAGA GCGGTGCGTT ATTATGCGCC TACACCCATA 
AGTGAGGAGA AGGTGCGCGA ATGTCTTAAA CTCGCCACAC TGGCACCTAC CAGCTCTAAT 
ATGCAGTTGT ACGAGCTCTA CCACATTACT GATAGGGCTT TGTTAGAGAA ATTAGCACAC 
GCCTGCCTCG ACCAGCGTAC GGCTACCACG GCACAACAAA TGGTGGTATT CGTTACTCGT 
CAGGACAAAC ATCGCGCTCA CGCTCGTGCT ATCTTGGAGT TTGAGCGTGG CAATGTACAG 
CGCAACAGTC CGCCCGAAAG GCAAGCCAAG CGTATTAAAG ATAAAGAGGC GTATTACAGT 
AAGCTGATGC CTTTTGTGTA TAGTAGATTT TTTGGGTTGC TAGGGCTCTT CCGCAAAGCG 
TTTGGGGTGG TTACCAGTTG GTTTCGACCT ATGATGCAAC AGCTCTCGGA AGGCGATATT 
CGCGTAAGTG TACACAAAAG CTGTGGACTC GTAGCACAGA CCTTTATGCT AGCAATGGCA 
GAGGAGGGTT ATGATACTTG TCCGTTAGAG GGTTACGATA GCAGACGCAT TAAGAAGTTG 
TTACACTTGC CTTGCGGAGC AGAAGTGAAT ATGGTGATTA CTTGTGGACT TCGTGAACAG 
CGCGGTATCT GGGGCGAAAG GTTTAGATTG CCGTTTGAGG AAGTGTACAG ACATAATGAT 
TAA
 
Protein sequence
MLKDILNFRR AVRYYAPTPI SEEKVRECLK LATLAPTSSN MQLYELYHIT DRALLEKLAH 
ACLDQRTATT AQQMVVFVTR QDKHRAHARA ILEFERGNVQ RNSPPERQAK RIKDKEAYYS 
KLMPFVYSRF FGLLGLFRKA FGVVTSWFRP MMQQLSEGDI RVSVHKSCGL VAQTFMLAMA 
EEGYDTCPLE GYDSRRIKKL LHLPCGAEVN MVITCGLREQ RGIWGERFRL PFEEVYRHND