| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0452 |
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| Symbol | |
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| ID | 8366858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 578524 |
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| End bp | 581100 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644982873 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_003140576 |
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| Protein GI | 256819297 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.150297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAAAT CTCTTTCCCA ACTAAGCGTT ATCAGTCTGT TATTCGTATT AGCCATTGCT
CTCTTTTCGT GCGATGCTAC CAAGCGTGTC CCTAACGACC GCCATTTGCT CCGTGAAAAC
CTCGTATATG TGAATGGTAC TAAGACCGAC GATGCAAAGA TAAACAATTT TGTATTACAA
AAGCCCAATT CGTATGTTTT AGGAATGCCT ATCAGTCTAT ATATCTACAA TTTAGGAAAC
CCTAATGCCG AAAAGGATTT TGTCCAATGG CTCAATACAC ACCCTCGTTG GCATAGGTTT
TTAGATGGTT TTCTCTCTAA AAAACAAGTA GGTCGCTTAC AGAAGTCGTT TTTCGTTTCA
GGCATCGATC ACCAGTTGCA GAAGATAGGC GAAGCCCCAT CGGTATTAGA TACAGCACGC
GTACACAAAT CCACCAAGCA GTTGGGAGCT TATTTCAGAA GTATAGGCTA TTTCAATAAC
AAAGTAACTG ATAGCATCTT CATTCTCCCT AATGAAGAAA AACAACAAGC CAAAGTGGGC
TATTATATCA CTACCGGCGA GCGCTATTAT ATCGATAGCT TAAAGACCCA TATCACTTCT
CCTGAAATAG ATTCAGTTTA CCAGCAAAAC AAGGCAAAAA CTTTCCTAAA ATCAGGAGCC
CCTTACCAGC TTACCGATTT TAGCAATGAA CGTTCACGCC TCTACGAACT CTTTCGCAAC
AACGGTTTTT ATACCTTTCA GCAAAGCTCT ATCAACTTCC AAATCGAGCG CGATACGGTT
ACAGCTCAAA AAGACAACAA ACTGCAAGTA ACTACTGATA TAGGCGACCT TATAGAACGC
GATGGCGATG TAATTACCGC CAAGAAGTAT AAGATGCACT ACATCAATAA AGTACGTCTG
TATACTGATT ATGACAACAA GGTAGATAAG AACTCTTTAG ATTCTTTGGA GTATCGCAAT
ATGATTATTT ATTACAAGGA CAAGTTGCGT TATCGTCCAC GGGTGTTGTA TCACGCTACA
AGCCTCAAAA AAGGACAAAT CTACTCCGAT TTAGAGCGCG GAAATACTTA CCGACAGTTC
AACAACCTGC GCGTCTTCCG CTACCCAAAT ATGGACTTCA AATACGCTAC CAATGACACT
TTGCAAAACA AACTCGATGC GAATATCTAC CTTTCGCCCT TAGATAAGTT TTCATTGCGA
CTTACCAATG AGGTAAAGCG TTCTGAGATT GAGGCGATAG GTTTTGGGGT AGGAACTTCG
TTTGCAGCAC GCAATGTCTT TCGTGGAGCA GAAACCTTAG AACTGAACTT GCAAGGTACT
TTTGCCTCAC AACCTACACT TAAAGATACA CGCTTTTTCA ATACCTCAGA AGTCAGTGGT
GATATACGTT TCATCTTTCC TTCTATCGTT TTCCCGCTGA ATACGCGCAA GCTCATCCCT
TATTATATGA CTCCACAAAC TATCTTGCAA ACGGGTATGA GCTACCAAAC AAATATAGGG
CTCGACAAAC GTACCACTTC GGGTTTGTTG CGCTATGTAT GGAATCCGCG TAAGCAGAAG
AACAAAGTCA TTTTCGATTT GATAAACGTA CAATACGTAA ACAATATCAA CTCAGGTAAT
TTCTTTAATA TTTACCAAAG TACTTATGAA AGGCTGAACG ATATTGCTAA AAAATACAGT
TTAGGTAGCC GATATGTAGA CGACAAAGGC AATCTTACCC CTACTGAGGG GACTTTTAAC
TTTATAAATG ATGTATTCGA AAGGAATTTG GTAGTTCAAG GTGAAGATAT TTTGCCTATA
TATGCTATTT CTGAACGCTA TCGTCGTATT ACAAATAATG ACTTTATTGT ATCAAGTAGT
TTTACTTATA TCATCAATAG CAAATCACAG TTTTTTGAAC GCAACTTCTC ACAATTGCGT
TTCAAGATAG AAGGAGCGGG GAGTTTGCTC AATGCTTTAA CAGCTACTTA TAAAGTGGTG
AATACCGAAG GTAGTACTAA GAATAAGATT TTTGGCGTGG AATACGCTCA ATATGCCAAA
GCTGAGGTCG ATTTTATCAA GCACTTCCCC ATAGCCAAAC AGAGTTCATT AGCATTCCGT
TCCTTCTTAG GGATAGCTAT TCCTTATGGT AACTCCGATA ATATTCCGTT TTCACAAAGC
TACTTTGCCG GAGGTACTAC CGATAACCGT GGTTTTAAAG CCTATCGTTT AGGACCTGGT
TCAAGTGGTT CGATTTTAGA TTACAACGAA GCCAATATGA AGATTACGCT CAATCTCGAA
TATCGTTTCC CTATCTTAGG AGCACTCAAA GGTGCCCTCT TCACCGATTT GGGAAATATC
TGGAACGTAG CCGATAATAC TCGTTTTGAT GAATACAAGT TTAAAGACTT TTCTTCATTA
AAAGATGTGG GGCTAAGTAC CGGATTTGGC TTGCGTTACG ACTTCAACTT CTTTGTAATT
CGCCTTGATA TGGGGGTACC TACATATGAC CCTTCCGAAG AAATGAGCAA CCGCTGGATA
AAGAAATTCA GAATCAAAGA AACCGTGTTC AACTTCGGTA TCAACTATCC GTTTTAA
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| Protein sequence | MRKSLSQLSV ISLLFVLAIA LFSCDATKRV PNDRHLLREN LVYVNGTKTD DAKINNFVLQ
KPNSYVLGMP ISLYIYNLGN PNAEKDFVQW LNTHPRWHRF LDGFLSKKQV GRLQKSFFVS
GIDHQLQKIG EAPSVLDTAR VHKSTKQLGA YFRSIGYFNN KVTDSIFILP NEEKQQAKVG
YYITTGERYY IDSLKTHITS PEIDSVYQQN KAKTFLKSGA PYQLTDFSNE RSRLYELFRN
NGFYTFQQSS INFQIERDTV TAQKDNKLQV TTDIGDLIER DGDVITAKKY KMHYINKVRL
YTDYDNKVDK NSLDSLEYRN MIIYYKDKLR YRPRVLYHAT SLKKGQIYSD LERGNTYRQF
NNLRVFRYPN MDFKYATNDT LQNKLDANIY LSPLDKFSLR LTNEVKRSEI EAIGFGVGTS
FAARNVFRGA ETLELNLQGT FASQPTLKDT RFFNTSEVSG DIRFIFPSIV FPLNTRKLIP
YYMTPQTILQ TGMSYQTNIG LDKRTTSGLL RYVWNPRKQK NKVIFDLINV QYVNNINSGN
FFNIYQSTYE RLNDIAKKYS LGSRYVDDKG NLTPTEGTFN FINDVFERNL VVQGEDILPI
YAISERYRRI TNNDFIVSSS FTYIINSKSQ FFERNFSQLR FKIEGAGSLL NALTATYKVV
NTEGSTKNKI FGVEYAQYAK AEVDFIKHFP IAKQSSLAFR SFLGIAIPYG NSDNIPFSQS
YFAGGTTDNR GFKAYRLGPG SSGSILDYNE ANMKITLNLE YRFPILGALK GALFTDLGNI
WNVADNTRFD EYKFKDFSSL KDVGLSTGFG LRYDFNFFVI RLDMGVPTYD PSEEMSNRWI
KKFRIKETVF NFGINYPF
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