Gene Coch_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0442 
Symbol 
ID8366848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp561064 
End bp562695 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content40% 
IMG OID644982863 
Producthypothetical protein 
Protein accessionYP_003140566 
Protein GI256819287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT ATATCACACT CTTTGTCATA TTGTTGTTGG GTAGGAATGT AGCGGTGGCA 
CAAGAGAGCA AAGAAGCTGT GCTCCACCGG CTCAACCAAA CCATTGAGCA GAGTGCTACT
TATATACAAG CCAAAGAACA GCGTATTACT TCCTTGGAAA AGACTCTTAA AAAAGCCTCT
CAACCAACAG AAAAATACGA CCTGCACAAA CAATTGTATA CCGAATACCG AAAATTTAAG
GTCGATTCGG CAGTAGCCTA TTTGCTGAAA AACGAACAAA TAGCAATAGC TTTAAACGAT
GCTGAAAAGC AAGACGAAAC CCATATCTTG CTCTCTAAAC TCTACTCGGT AAAAGGAATG
TACGTAGAAG CGTTGCAACT GCTAAAAGCT ATCGATAAAC ACCGATTACC CAAGGAATCA
CTGTGTGAAT ATTACGATTC GTGTTATGCC TTGTGCAGTC ATTACGGGCA AAGCATCAAT
AATAGTGCTT ATTTAAGTGC CTCCAACCGC TACCGCGATT CCTTACTATT GTGCATAGAC
AAACAGTCGC TTACTTTTAA GGTAAACAGT GCTATCGATG AGTTCTTTAC AGGAGACCAA
AACCGCGCTA TGCAACAGTT TCAGCAACTA TTGCCTCAAA CTACCGAAGA GGAACCTGAA
CGTGCTATAA TAGCTTATTA TTTAGGTCTT GTAGAACGAG AAAAAGGAAA TGACAACCTT
CAAGAATACT ATTTTGCCCT TTCTGCTATC GCCGACATCA AAAATGCAAT CAAAGATAAC
GCTTCCTTGC AGAGCTTAGC GCTTACTTAC TACAAACGAG GGAATATAAG CAAAGCCTAT
CAGTTTATCA AAATGGCAAT AGATGATGCT GCCTTCTGCA ATGTGCGACA CCGCGCCGAA
GAAGGTGCCT CTTTCTATTC CATCATCAAC ACCGCCTATC AAGAGAAAGA AGCCAAACAA
AAGAAAGAAT TACAACTGTA TTTGGTACTC ATCAGTGTGT TATCAGTAGC CCTGATTATC
GCTTTGGTAT ATGTGTACAA ACAAGTAAAG CGATTGATAA AGATACGTAA AGAACTCTCT
TACAGTAATC AGCAACTCGA AAAGCTCAAT ACCGACCTAC AACTGATGAA CCAAAACCTC
GAAGAGGCAA ACCTCAACCT CGAGGAGGCA AATCTTATTA AAGAAGAGTA TATTGCTCAT
TTCTTCAACC TCTGTTCTGC TTATATCGAT AAGATTGAAA ACTACCGAAA ACTACTCTAC
AAAAAGGCTT CTAAACATCA GTTTGACGAC CTTACCAAGG TGCTAAAATC TACCTCCGTA
GTAGAACAAG AATTAGAGGT ACTTTACAAA AATTTCGATA CCATCTTCCT CAATATATAC
CCGCATTTTG TAACCCACTT CAACGCTCTT TTAGAAGAAG GCGAACAAAT CTTCCCTAAA
AAAGGTGAAC TACTGAATAC CGAATTGCGT ATTTTTGCCC TTATTCGTTT AGGCATCACC
GATAGCAATA AGATAGCCGA ATTCTTGCGT TATTCTCTTC GCACAGTGTA CAACTATCGC
ACCAAAGTAC GGAATAAAGC GAAAGGAGAA CGCGATACTT TCGAAGAAAA AGTGAAGAAA
ATACGTAATT AA
 
Protein sequence
MKNYITLFVI LLLGRNVAVA QESKEAVLHR LNQTIEQSAT YIQAKEQRIT SLEKTLKKAS 
QPTEKYDLHK QLYTEYRKFK VDSAVAYLLK NEQIAIALND AEKQDETHIL LSKLYSVKGM
YVEALQLLKA IDKHRLPKES LCEYYDSCYA LCSHYGQSIN NSAYLSASNR YRDSLLLCID
KQSLTFKVNS AIDEFFTGDQ NRAMQQFQQL LPQTTEEEPE RAIIAYYLGL VEREKGNDNL
QEYYFALSAI ADIKNAIKDN ASLQSLALTY YKRGNISKAY QFIKMAIDDA AFCNVRHRAE
EGASFYSIIN TAYQEKEAKQ KKELQLYLVL ISVLSVALII ALVYVYKQVK RLIKIRKELS
YSNQQLEKLN TDLQLMNQNL EEANLNLEEA NLIKEEYIAH FFNLCSAYID KIENYRKLLY
KKASKHQFDD LTKVLKSTSV VEQELEVLYK NFDTIFLNIY PHFVTHFNAL LEEGEQIFPK
KGELLNTELR IFALIRLGIT DSNKIAEFLR YSLRTVYNYR TKVRNKAKGE RDTFEEKVKK
IRN