Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0402 |
Symbol | |
ID | 8366808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 509661 |
End bp | 510593 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644982823 |
Product | sugar transferase |
Protein accession | YP_003140526 |
Protein GI | 256819247 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT TTAATCATAG ACCAACTTGC TTATTTATCA ATGTAGGAGG AATTTTAGAA AAATTGCTTG AGGAATCTAA TGTGTCTAAG TTTTATAGAA TTATCAAATA TGATATTTCC AAGAAAAAAA GAACCATTTC GAGTATTGTC AATAAGCTAA AAATAGTAAT TATTGTTATT GAAACTTCAA AAATCAAGGA ATATCCTGAT AATATCATTA GAGAAATTAT CGATTTAAGA ACCAAAGGCA TTATTGTTTA TGAAGCAGAA GAATTTTACG AAAATATCAA CAAACGTATT CCTATCGTAA AATTGGAAGC TAAAAAGTAC ATTGGTGATG ATATTTTTTC TATAAAACAG AGAATTAGAC ACCGTTTGAT CAAACGTGTT TTTGATTTAA CACTTGTTCT CTTAGCCCTT CCTATAGCAT TGCCACTAAC TATTGTAGGT GTCATTCTCA CTCTTTTAAG TTCAAAGGGG GGTGCTTTCT TTGCTCAAAC ACGAGTGGGG AGAGAAGGGA AGACTTTTAA AATTTACAAA ATCAGAACTA TGGTACTAAA TAGTGGAGGC TTTACTCAGG TAAATGACTC TCGTATTACT CCTATTGGAA AAATATTGCG TTTTACCAAA ATAGACGAGC TACCACAATT ATACAACGTA TTGAGAGGAG ATATGAGCAT CATAGGTCCT CGTCCTGAAA TTCCTGAATA TGTAGAAAAA TATGCAGAAC AGATACCTTT TTTCAAACTG CGCCATATGG TGAAACCAGG AGTTACAGGA TGGGCTCAAA TTCACATTCC AAAAGCAACC CCTGAAGATA GCATTAAGAA ATTAGAATAT GATTTGTATT ACATCAAGCG GTATTCACTA TCTCTTGATA TTAAAATAGT GCTTGAAACT GCAAAAATTG TACTTACTTT AAATAGTAAC TAA
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Protein sequence | MKIFNHRPTC LFINVGGILE KLLEESNVSK FYRIIKYDIS KKKRTISSIV NKLKIVIIVI ETSKIKEYPD NIIREIIDLR TKGIIVYEAE EFYENINKRI PIVKLEAKKY IGDDIFSIKQ RIRHRLIKRV FDLTLVLLAL PIALPLTIVG VILTLLSSKG GAFFAQTRVG REGKTFKIYK IRTMVLNSGG FTQVNDSRIT PIGKILRFTK IDELPQLYNV LRGDMSIIGP RPEIPEYVEK YAEQIPFFKL RHMVKPGVTG WAQIHIPKAT PEDSIKKLEY DLYYIKRYSL SLDIKIVLET AKIVLTLNSN
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