Gene Coch_0394 details

Gene Information

• Locus tag: Coch_0394
• ID: 8366800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 501380
• End bp: 501964
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 644982815
• Product: riboflavin synthase, alpha subunit
• Protein accession: YP_003140518
• Protein GI: 256819239
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCACAG GAATTATAGA AGAAATAGGT AAAATCGTAC AGATAGAACG CGAAGAGGCG 
AATCTGCATT TATACGTAAA AAGTTCGTTT ACAAATGAAC TAAAAATAGA CCAAAGTGTT 
GCCCATAATG GGGTATGCCT TACGGTAGTG GCTATCGATG GCGATGTATA CCGAGTAACC 
GCTATTGCCG AAACTCTTGC CAAAACCCAC TTGGGCAGTT TGCAAGTGGG TGATGCGGTA 
AACTTAGAGC GCGGTATGCT TCTCAACACC CGCTTAGACG GACATATCGT GCAAGGTCAC 
ATCGACCAAA CGGGTACTTG TAGTGCTATC CAAGAAGAAG CAGGTAGCAC CCGTTTTACT 
TTTGAGTACG ACCCCTCTAC TGGTAATGTG GTAATTGAAA AAGGCTCTAT TACTGTGAAT 
GGTGTAAGCC TAACGGTAAT AGATGCGACT TCCCATAGTT TTAGTGTAGC AGTAATTCCC 
TATACTTTAG CACATACCAA TCTGCAATAC TTACAAATAG GTAGTGTTGT AAATTTAGAA 
TTCGATGTGA TTGGTAAATA TGTCGCCCGA CTTATGCAAC GGTAA 

 

Protein sequence

MFTGIIEEIG KIVQIEREEA NLHLYVKSSF TNELKIDQSV AHNGVCLTVV AIDGDVYRVT 
AIAETLAKTH LGSLQVGDAV NLERGMLLNT RLDGHIVQGH IDQTGTCSAI QEEAGSTRFT 
FEYDPSTGNV VIEKGSITVN GVSLTVIDAT SHSFSVAVIP YTLAHTNLQY LQIGSVVNLE 
FDVIGKYVAR LMQR