Gene Coch_0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0356 
Symbol 
ID8366762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp443845 
End bp444354 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content40% 
IMG OID644982777 
ProductColicin V production protein 
Protein accessionYP_003140480 
Protein GI256819201 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA TAGATATTTT ATTATTGGTA ATTCTGGCTT TCGGAGCTGT ACGTGGCTTT 
ATGCGAGGAG TTATCATCGA AATGGCATCG CTATTAGCTA TTGTGATAGG TATCTATGGG
GCGATACACT TTTCGTTCTT TACAGCCTCG TTGTTAGACA AGATTCTACC AGCCGAAAAA
CAAACCTTGG AGATTTTTGC ATTTGGTATT ACTCTCATTG TATTAATGCT GGGGGTAATG
CTCTTAGCTA AAGTCCTTAC CCAGATGCTT AAAATTGCCG AACTCGGTTT TCTGAACCGT
TTAGCAGGAG CCTTGTTTGG CTTACTCAAA GTGGCTGTAA TTGCAGGGTC GATGTTCTTG
TTTTTAGAGC GTACCTTTCA AACCGAAAAG TGGCTCTCAG TCTCCGCTTT GAGTGAATCT
CTTCTGTACA AACCCGTAAA GAGTATCAGT CAAGTAGTAT ACGCCAATGT ATTTCCCGAG
AAAGAGAAAA AAGAACAGAA AAGTGAATAA
 
Protein sequence
MNKIDILLLV ILAFGAVRGF MRGVIIEMAS LLAIVIGIYG AIHFSFFTAS LLDKILPAEK 
QTLEIFAFGI TLIVLMLGVM LLAKVLTQML KIAELGFLNR LAGALFGLLK VAVIAGSMFL
FLERTFQTEK WLSVSALSES LLYKPVKSIS QVVYANVFPE KEKKEQKSE