Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0356 |
Symbol | |
ID | 8366762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 443845 |
End bp | 444354 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644982777 |
Product | Colicin V production protein |
Protein accession | YP_003140480 |
Protein GI | 256819201 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGA TAGATATTTT ATTATTGGTA ATTCTGGCTT TCGGAGCTGT ACGTGGCTTT ATGCGAGGAG TTATCATCGA AATGGCATCG CTATTAGCTA TTGTGATAGG TATCTATGGG GCGATACACT TTTCGTTCTT TACAGCCTCG TTGTTAGACA AGATTCTACC AGCCGAAAAA CAAACCTTGG AGATTTTTGC ATTTGGTATT ACTCTCATTG TATTAATGCT GGGGGTAATG CTCTTAGCTA AAGTCCTTAC CCAGATGCTT AAAATTGCCG AACTCGGTTT TCTGAACCGT TTAGCAGGAG CCTTGTTTGG CTTACTCAAA GTGGCTGTAA TTGCAGGGTC GATGTTCTTG TTTTTAGAGC GTACCTTTCA AACCGAAAAG TGGCTCTCAG TCTCCGCTTT GAGTGAATCT CTTCTGTACA AACCCGTAAA GAGTATCAGT CAAGTAGTAT ACGCCAATGT ATTTCCCGAG AAAGAGAAAA AAGAACAGAA AAGTGAATAA
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Protein sequence | MNKIDILLLV ILAFGAVRGF MRGVIIEMAS LLAIVIGIYG AIHFSFFTAS LLDKILPAEK QTLEIFAFGI TLIVLMLGVM LLAKVLTQML KIAELGFLNR LAGALFGLLK VAVIAGSMFL FLERTFQTEK WLSVSALSES LLYKPVKSIS QVVYANVFPE KEKKEQKSE
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