Gene Coch_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0323 
Symbol 
ID8366729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp407479 
End bp408783 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content42% 
IMG OID644982744 
Productsodium/hydrogen exchanger 
Protein accessionYP_003140447 
Protein GI256819168 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAT ACTACGCTTT TTCAGTAATT ATCGTCTTAG CAGCCTTGTT TTCGTACGTG 
AATGTTCGCT ACATAAAACT GCCTATGACC ATAGGTATTA TGGTGATTGC TATGATGGTA
TCGGTAGGCG TACGTCTTTT CGGAGGAGAA ATATTTACAG GGCTTGCACA CCGTCTTGAA
TCGCTTTTAG AAGGCTTTGA CTTCACCGAA ATACTGATGG GAGCAATGTT GAACTTCCTT
CTCTTTGCAG GAGCTCTCCA CATTAATATC AACGACCTTA AAAACTACAA AATCTCCATT
TTTACTTATG CAACTATCAG TGTAGTACTT TCGGCTTTCT TTATATCAGT CTTGCTGTAC
TACATTGCTC CTTTGGTAGA TATCCATATT CCTTACATTT ATTGTCTGCT TTTTGGTACG
CTTATTTCCC CAACTGACCC TATTGTGGTG TTGGGAGTAC TCAAACAAGT GAAAGTACCT
AAACGTATTG AAACTAAGAT TACGGGTGAA TCGCTTTTTA ACGATGGGGT AGCGGTAGTA
ATGTTTGCCG TAGTGCTGAA ATTGGCTACT AATAGCACTT TTGAGCCTTC GTTCTTTGCT
ATTACTAAGC TCTTTCTCTT GGAAGCAGGA GGAGGCATTT TCCTCGGAGT GCTCTTGGGA
TGGATAGCTT CTCAAATGAT GAAAAAAGCC GATGACTATC ACGTGAGTGT GCTTGTCACT
TTGGCAGTGG TAATGGGTGG TTTTCTTATC ACCAAAGCTT CTCACGTTTC TTCGCCTCTG
GCAATGGTAA TTGCAGGACT TTTTGTAGGA AATGTAGGCA AGAAAGCCAG CAGTGCAGAG
AATAAAGATT ACCTTGAAAA GTTTTGGGCA ATCATAGACG AGATTATGAA TGCTATCTTG
TTCCTATTCA TAGGATTTGA GATGCTACTG ATAGACAATC TAACAGAGCA GTTCCTTTTA
GGTGGGGTAG CTATTCTCGT ATGCCTCTTG GGGCGTGCAC TGGCAATCTA TATTCCTGCC
AAAACGATAT TACGCAAGGT AGCTACCTAT TCGCGTGGCT CGCTCATCAC AATGGTGTGG
GGGGGTATTC GCGGGGGAGT ATCCATCGCC TTGGTACTCT CTATCCCTGC TGATAAAGGA
GGATTTAAAG AAACACTGTT GCAAATTACT TATATTGTAG TATTGTTTTC CATTTTAGTA
CAAGGTCTTA CCGTAGGCAA AGTGGCTACC AGAGCCTTGT ATCGCGATGA GGTGATGACA
CGCTTGAAAA GAATGAAACA ACTGCAAAGA GGGAAACAAT CATAA
 
Protein sequence
MELYYAFSVI IVLAALFSYV NVRYIKLPMT IGIMVIAMMV SVGVRLFGGE IFTGLAHRLE 
SLLEGFDFTE ILMGAMLNFL LFAGALHINI NDLKNYKISI FTYATISVVL SAFFISVLLY
YIAPLVDIHI PYIYCLLFGT LISPTDPIVV LGVLKQVKVP KRIETKITGE SLFNDGVAVV
MFAVVLKLAT NSTFEPSFFA ITKLFLLEAG GGIFLGVLLG WIASQMMKKA DDYHVSVLVT
LAVVMGGFLI TKASHVSSPL AMVIAGLFVG NVGKKASSAE NKDYLEKFWA IIDEIMNAIL
FLFIGFEMLL IDNLTEQFLL GGVAILVCLL GRALAIYIPA KTILRKVATY SRGSLITMVW
GGIRGGVSIA LVLSIPADKG GFKETLLQIT YIVVLFSILV QGLTVGKVAT RALYRDEVMT
RLKRMKQLQR GKQS