Gene Coch_0312 details

Gene Information

• Locus tag: Coch_0312
• ID: 8366718
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 394376
• End bp: 394816
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 644982733
• Product: hypothetical protein
• Protein accession: YP_003140436
• Protein GI: 256819157
• COG category: [R] General function prediction only
• COG ID: [COG5378] Predicted nucleotide-binding protein
• TIGRFAM ID: [TIGR00305] probable toxin-antitoxin system toxin component, PIN family

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.635435
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGTAA TAACTGATAG CAATATATTT TTTAGCGCAC TTATTTCTCC TGATGGAGTC 
GTAGCAAAAG TTCTTAACGA AAAGAAAAAG ATACAATTCT TGGTGCCGGA ATATTTATTA 
GATGAAGTAG AAGAACACTT GCCTCGACTC TCAAAGTTTT TGAATAAAAC AAAGAAAGAG 
GTTAAAAAGG AGTTGGCTAA TCTTTTAGAA GGGGTAAAAA TCCTTTCAAT GAAAAATATT 
TCAAAAGAGA ATGACAAAAA AGCTCAGGAG ATAGTAGCTG ATATAGATAT TGATGATGCT 
CCTTTTATAG CCTTTCATTT GCAATATAAA CACAAAATAT GGTCGGGTGA TAAGCAACTC 
AGAAAAGGAC TTACTGCAAA AGGGTATGGA CATTTTTTTG TAACACTCGA AGAACTCAAA 
CAAAGAATTT ACAAAAAGTA A 

 

Protein sequence

MIVITDSNIF FSALISPDGV VAKVLNEKKK IQFLVPEYLL DEVEEHLPRL SKFLNKTKKE 
VKKELANLLE GVKILSMKNI SKENDKKAQE IVADIDIDDA PFIAFHLQYK HKIWSGDKQL 
RKGLTAKGYG HFFVTLEELK QRIYKK