Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0259 |
Symbol | |
ID | 8366664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 337787 |
End bp | 338266 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644982679 |
Product | Biopolymer transport protein ExbD/TolR |
Protein accession | YP_003140383 |
Protein GI | 256819104 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.352698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAT TTACAAAAAA GAAAAGTGGC GAAACGCCCG CTGTTTCTAC GGCTTCTTTG CCAGATATCA TCTTTATGCT TTTGTTCTTC TTTATGACAG TAACAGAATC TAAAGACAGT GATTTGATGG TACAAAATAA GTTGCCAGTG GCAGACCAGG TACAAAAATT GGACAAGAAA GACCCAGTTG TGTACATTTA TGCAGGGAAA CCACTTCCTA AGTATCAGGC TAAGTTTGGT GTAAACGCTA AAATCCAAGT GAACGATAAA TTCATTGATG TTTCGGAGGT AAGCCACTAT ATATTGAATT ATAGAGAAGG TTTACGCGAT GCACTAAAAG ATGTATTTAT GACCGCTTTG AAAGTAGATG CTGATACCAA TATGGGATTA GTGAGTGATA TTCGTGAGAA ATTGCAAGAT GTTAATGCCT TGAAATTGAC TTATATCGCT CGTGAAGGTT CTCCTTTGAA TCAAAAATAA
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Protein sequence | MSKFTKKKSG ETPAVSTASL PDIIFMLLFF FMTVTESKDS DLMVQNKLPV ADQVQKLDKK DPVVYIYAGK PLPKYQAKFG VNAKIQVNDK FIDVSEVSHY ILNYREGLRD ALKDVFMTAL KVDADTNMGL VSDIREKLQD VNALKLTYIA REGSPLNQK
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