Gene Coch_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0259 
Symbol 
ID8366664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp337787 
End bp338266 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content36% 
IMG OID644982679 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003140383 
Protein GI256819104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.352698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAT TTACAAAAAA GAAAAGTGGC GAAACGCCCG CTGTTTCTAC GGCTTCTTTG 
CCAGATATCA TCTTTATGCT TTTGTTCTTC TTTATGACAG TAACAGAATC TAAAGACAGT
GATTTGATGG TACAAAATAA GTTGCCAGTG GCAGACCAGG TACAAAAATT GGACAAGAAA
GACCCAGTTG TGTACATTTA TGCAGGGAAA CCACTTCCTA AGTATCAGGC TAAGTTTGGT
GTAAACGCTA AAATCCAAGT GAACGATAAA TTCATTGATG TTTCGGAGGT AAGCCACTAT
ATATTGAATT ATAGAGAAGG TTTACGCGAT GCACTAAAAG ATGTATTTAT GACCGCTTTG
AAAGTAGATG CTGATACCAA TATGGGATTA GTGAGTGATA TTCGTGAGAA ATTGCAAGAT
GTTAATGCCT TGAAATTGAC TTATATCGCT CGTGAAGGTT CTCCTTTGAA TCAAAAATAA
 
Protein sequence
MSKFTKKKSG ETPAVSTASL PDIIFMLLFF FMTVTESKDS DLMVQNKLPV ADQVQKLDKK 
DPVVYIYAGK PLPKYQAKFG VNAKIQVNDK FIDVSEVSHY ILNYREGLRD ALKDVFMTAL
KVDADTNMGL VSDIREKLQD VNALKLTYIA REGSPLNQK