| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0229 |
|---|
| Symbol | |
|---|
| ID | 8366634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 303614 |
|---|
| End bp | 304978 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644982649 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003140353 |
|---|
| Protein GI | 256819074 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4282] Protein involved in beta-1,3-glucan synthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.615925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGG AAAAAACTGT CAAACGTTTT TTAGACGTAA TACTTGAACA AGCAACTCCT
CTTATTGCAA GTCTCAACAA AGGCGTTTCG GATACCCAAA TAGCGGTATT TGAGGCGGAA
ATGGGTATTA CTTTGCCTTC TGAGGTGAGA AAGCTATACC AGACTTTCAA CGGGCAAAAA
GAAGGCGAAA ACGATATATT CTTCTTAAAT GGGTTGCGTT TTATTCCCTT AGAAGAAATC
AAACGCACCC AAGAACACTG GCTTGAGCAA TTGGAGAGTG TGCCTAATTG GCAGTCACTC
CGCTTTGATG AAGAAGAGGC AATTGATATG TGCTGGGACA AGGTAGTGAA AAACCAATTT
TATAATCCTA AATGGATTCC GTTCCTCTCC AATGGGGCGC GCTTTATGTT CATAGACCTC
GATCCCGATG AAGAAGGCGT GATAGGTCAG ATAGGAGAAA TAGATTTGGT GTTGGACTCT
ATAGAAGCCT CTTTTATGGA TTTGTACCAC GACTCTATGG AAGATTGGCT CGAATTCCTT
ACTGATGATA TCGAAAAGGG AATCGTGTAC TACGACAACG AGATGCACTC GCTCATTGAA
GCCGTTTCTT ATGATGAAGA AAACGATTTG CCTAATATCT TTGCCCCTAC CCCCGATTAT
ATATCGGAAG GAGGCTCTAA CGTCTATAAC TATTCCGAAA AAGATAGAAG CGATTTTGTA
TTGCCCGACC GTACTTGTGT GTATATGGAC GAAATTTGCG ACCATTTCGA AAAATATATC
GGCAAAATAG ACAGCGTTTT CCACGAAATC CTCTCAGAAT ACGTGCATAT AGATGTACAT
TGGATCAAAC CTACCCCCGA AACCCCTTAC CACGTGCTTT TTACTACCGG TATGAGCGAC
TACCCGATGT ATTTGCCCGA AGGCTTAGAT GACCCGAACG ATTATAGCCA CGCCGAGTTA
ATGGTCTATC TCCCCGTCGA TTGGCCTATC AGCGATGAGG CTTTTAAAGA CGACGATAAC
TATTGGCCTA TCTACTTTCT TAAAATGATA TCACGTTTTC CTCATCAGTA CAAAACGTGG
ATGGCAGAAG GGCACACTAT CCCCAATGGT CCCGATGCCG AGCCTATTGC TAATACCGAT
TTCGGTTGTA TACTGCTAAT GCCCCCTTAC TTATCGGCTC CACAGGACTT CTTAAAGTTA
CACACCAAAG ACGGTACAAT TATCAATTTC TATTGTATTT TGCCTATTTA TCCAGAAGAA
ATGGATTTAA AATTAGAAGA AGGTGTTGAC GAGCTTCTCA GTCTTTTTGA TGAATACCAA
ATCTCCGAAG TTATAGATAT TCACCGCAAG AACGTAGCTT TATAA
|
|---|
| Protein sequence | MTMEKTVKRF LDVILEQATP LIASLNKGVS DTQIAVFEAE MGITLPSEVR KLYQTFNGQK
EGENDIFFLN GLRFIPLEEI KRTQEHWLEQ LESVPNWQSL RFDEEEAIDM CWDKVVKNQF
YNPKWIPFLS NGARFMFIDL DPDEEGVIGQ IGEIDLVLDS IEASFMDLYH DSMEDWLEFL
TDDIEKGIVY YDNEMHSLIE AVSYDEENDL PNIFAPTPDY ISEGGSNVYN YSEKDRSDFV
LPDRTCVYMD EICDHFEKYI GKIDSVFHEI LSEYVHIDVH WIKPTPETPY HVLFTTGMSD
YPMYLPEGLD DPNDYSHAEL MVYLPVDWPI SDEAFKDDDN YWPIYFLKMI SRFPHQYKTW
MAEGHTIPNG PDAEPIANTD FGCILLMPPY LSAPQDFLKL HTKDGTIINF YCILPIYPEE
MDLKLEEGVD ELLSLFDEYQ ISEVIDIHRK NVAL
|
|---|
| |