| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0190 |
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| Symbol | |
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| ID | 8366595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 226483 |
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| End bp | 227970 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644982610 |
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| Product | GH3 auxin-responsive promoter |
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| Protein accession | YP_003140314 |
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| Protein GI | 256819035 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.210438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAT CATATATATC CAAAATATTT GCCTCTATCG TTAAAAAAAA GATAGACCGC
TGGGTTAAAG CTCCAATAGA CACACAACAA AAAGTATTCC TGTCGCTTAT AGAACAAGCC
AAAAATACGG CTTTTGGGCG TGACCATCAT TTTGAGGAAA TCCAAACGTA TGAAGATTTT
GTTGCCCGCG TGCCTATACG CGATTATGAA GCCTTGCGTC CTTATATCGA TAGGGTAGTG
GAAGGCGAAA AAGATGTGCT ATGGAAAGGC AAACCGCTCT ATTTTGCCAA GACTTCAGGG
ACTACCAGCG GGGCGAAGTA TATCCCTATT ACCAAAGACT CGATGCCCTT CCATATTCAG
GCAGCACGTG ATGCGATTTT ATGTTATATA CACGAGACTA AAAAAGCCGA TTTTGTAGAA
GGAAAGATGA TTTTCTTGCA AGGAAGTCCT ATTTTAGGTG AAAAAAACGG CATTAAAACA
GGACGACTTT CGGGCATCGT GGCACACTAT GTGCCTGCTT ATTTGCAGCG CAATCGTATG
CCTTCGTATA AAACCAACTG TATAGAAGAT TGGGAGACCA AAGTAGAAGC GATTGTTACC
GAAACTTTTT CTGAAAATAT GACTCTCATC AGCGGGATAC CTTCGTGGGT GCTGATGTAC
TTCGAGCGAT TGTACACGCG CTCTGGTATT AAAGTAGGAA AACTGTTTCC TAATTTCAAC
TTGTTTATTT ATGGAGGGGT GAACTACGAG CCTTATCGCC AACAATTTGA GCACCTCATC
GGGCGCAAAG TGGATAGCAT AGAACTCTAT CCCGCCAGCG AGGGATTCTT TGCCTATCAA
GATAGTCAGA CAGAGAAAGG AATGCTCTTA TTGCTCAATT CGGGTATTTT TTACGAGTTT
GTAGAAGCTG ATACTTTCTT CAGTGATGCT CCCAAACGAG TGGCTTTGCA GGACGTACAA
TTGGGGGTGA ACTATGTACT CATTATTTCT ACCAATGCCG GCCTTTGGGG TTACAACATA
GGCGACACGG TGCAATTTAC TTCGCTTGCG CCTTACCGCA TCGTAGTTAC AGGGCGCATT
AAGCATTTTA TTTCGGCTTT TGGCGAACAC GTGATTGGCA AAGAAGTGGA AGAGGCAATG
CGCGAGGGGT TAGAGGCTAC AGGAGCGCGT ATCACAGAAT TTACGGTCGC TCCTCAGGTA
AATCCGGTAG GAGGTGAATT GCCTTATCAC GAGTGGTTTG TAGAATTTGA GCAAAAACCT
ACTGATATGA AACGCTTTGC CCAAGTGATA GATGAGGCGT TACAAAAACA GAATATGTAC
TACTACGACC TCATACAAGG TAAAGTACTC CAACCACTCA AAATTACCGA AGTTCCCGAA
AGCGGTTTTG CTTCTTATAT GAAGTCGCAA GGAAAACTCG GCGGACAGAA TAAAATACAG
CGATTGGCGA ATGATAGAAG CCTTGTGGAG CGATTAGTTA AAAGTTAA
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| Protein sequence | MIKSYISKIF ASIVKKKIDR WVKAPIDTQQ KVFLSLIEQA KNTAFGRDHH FEEIQTYEDF
VARVPIRDYE ALRPYIDRVV EGEKDVLWKG KPLYFAKTSG TTSGAKYIPI TKDSMPFHIQ
AARDAILCYI HETKKADFVE GKMIFLQGSP ILGEKNGIKT GRLSGIVAHY VPAYLQRNRM
PSYKTNCIED WETKVEAIVT ETFSENMTLI SGIPSWVLMY FERLYTRSGI KVGKLFPNFN
LFIYGGVNYE PYRQQFEHLI GRKVDSIELY PASEGFFAYQ DSQTEKGMLL LLNSGIFYEF
VEADTFFSDA PKRVALQDVQ LGVNYVLIIS TNAGLWGYNI GDTVQFTSLA PYRIVVTGRI
KHFISAFGEH VIGKEVEEAM REGLEATGAR ITEFTVAPQV NPVGGELPYH EWFVEFEQKP
TDMKRFAQVI DEALQKQNMY YYDLIQGKVL QPLKITEVPE SGFASYMKSQ GKLGGQNKIQ
RLANDRSLVE RLVKS
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