| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0185 |
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| Symbol | |
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| ID | 8366588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 220102 |
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| End bp | 221805 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644982603 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_003140309 |
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| Protein GI | 256819030 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.735964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA CAGGTTTTTT CAAGGGGTAT CAAGAGGCAG AGTTATACTT CTACGAATGG
AATTACAAGC CTCAACAAAA AACACTTATT GTAATACATC GCGGTCACGA GTACGGTGAG
CGCTTACAGG AATTTGCTAC GCACCCGCTG TTTGCGTCCT ATAATATTTT TGCTTTTGAT
ATGAGAGGAC ACGGGCATAC TAAAGCTTCA GTATCGCCTG CTTTTATGGA TTCAGTACGA
GATTTAGATG CTTTTGCTAA GTTTTTGCAA CAAGAATACG GCGTGCAAGA AGAGGATATT
TTTGTAGTAG CCAACAGCAT AGGAGGGGTG ATTGTATCGG CTTGGGTACA CGATTTTGCT
CCACGTATTG CTGGAATGGC ACTTTTAGCA CCTGCTTTTG AAATCAATTT AATAGTTCCC
TTAGCCAAGC AAGCTATAGA ATTAGCACTA AAAGTGAAAC CTAATCTTGT TGTAAAGAGC
TATGTTAAGT CTAAAATGCT CACTCGTGAC CCTGAACAGC AACGCGCCTA TGATACCGAT
AGGTTTATCA CGCGGTCTAT CAACGGGAAA CTGCTTATAG ATTTAGCTAA TGCAGGTAAG
CGATTGGTGG AAGATGCTGC TGCTATTACT ATTCCTACAC TACTGCTTTC AGCTGAAAAA
GACTTTGTGG TGATTAACAA GCAGCAGAAA CAATTCTATG TAAACTTATC TTCTGAAATA
AAAGAATTTG TTACCTTAGA AGGATTCCAC CACGGCATTT TGTTTGAGCA AGGCAGAGAA
GAGGTATATA AATTACTTGA ACAGTTTATC AGTAGAGCTT TTGAAACACC TCTTGTATCA
CCTTCTTTGA AACCCGATAC TTTTACTCAA AAAGAGTATG AAATAATGCA ATACGAGCTC
ATACCCAATA GAGAAAAGTA CTATTACCGA TTTCAGAAAT GGGCACTGAG TAAGTTAGGA
TACCTCAGTG GCGGAATGGC GATAGGACTG GAATATGGAT TTGATTCAGG AGCTTCAATG
GATTACGTTT ACAAGAATAT TCCTCAAGGG AAATGGGGTA TAGGTAAACT GATGGACAAA
AGTTATCTCA ATGCCATTGG GTGGCGAGGC GTACGTATAC GCAAAGCACA CTTATTGGAG
CAAGTAGATA AAGCGATACA AGCTTTGCAA GCCGAAGGGA AGAAAGTAAA GATACTTGAT
ATTGCTGGAG GAGTAGGTAA TTATTTGTTT GACATCAAAG AAAAGCACCC AGAGGTAGAA
ATTGTCATCA ATGAGTTTTT ACCAGCTAAT ATAGAAAAAG GGGAGCAAAC CGTCAGAGAA
AGAGGCTTTC AAGATATACG ATTCACTAAC TACAATTGTT TTAAAGCCGA TAACTACACA
AGTTTAGACT ATAATCCTAA TATCACTATC ATATCTGGTA TTTTTGAACT TTTTGGTGAT
AATAAATTAG CTAATGAGGC GGTAAAGGGA GTTGTGTCGA TTTCAGAAAA CGGTTTTTTG
ATTTATACAG GACAGCCGTG GCACCCACAA CTCAAAACGA TAGCCTTTGT ACTAAAAAGT
CATCAAGAGA GAGATTGGGT GATGCGTCGC CGTAGTCAGC GAGAGTTAGA CGGGATATTT
TCTCTTAATG GAGTGCAAAA GCAGGATATG CTGATAGATG ATTTTGGAAT TTTTACAGTT
TCATTAGGGA AGATAGAAAA ATAG
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| Protein sequence | MMNTGFFKGY QEAELYFYEW NYKPQQKTLI VIHRGHEYGE RLQEFATHPL FASYNIFAFD
MRGHGHTKAS VSPAFMDSVR DLDAFAKFLQ QEYGVQEEDI FVVANSIGGV IVSAWVHDFA
PRIAGMALLA PAFEINLIVP LAKQAIELAL KVKPNLVVKS YVKSKMLTRD PEQQRAYDTD
RFITRSINGK LLIDLANAGK RLVEDAAAIT IPTLLLSAEK DFVVINKQQK QFYVNLSSEI
KEFVTLEGFH HGILFEQGRE EVYKLLEQFI SRAFETPLVS PSLKPDTFTQ KEYEIMQYEL
IPNREKYYYR FQKWALSKLG YLSGGMAIGL EYGFDSGASM DYVYKNIPQG KWGIGKLMDK
SYLNAIGWRG VRIRKAHLLE QVDKAIQALQ AEGKKVKILD IAGGVGNYLF DIKEKHPEVE
IVINEFLPAN IEKGEQTVRE RGFQDIRFTN YNCFKADNYT SLDYNPNITI ISGIFELFGD
NKLANEAVKG VVSISENGFL IYTGQPWHPQ LKTIAFVLKS HQERDWVMRR RSQRELDGIF
SLNGVQKQDM LIDDFGIFTV SLGKIEK
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