Gene Coch_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0182 
Symbol 
ID8366584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp216664 
End bp217215 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content36% 
IMG OID644982599 
Productconserved hypothetical protein, secreted 
Protein accessionYP_003140306 
Protein GI256819027 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA AACTCATCGC TATTGTAGCT TTTGTTTTGG TAGCTACTGC TACTCTTGAA 
GCTCAGGAAA TTAAATGGAT GACTTTTGAC CAAGCTATTG CTGCTCAAAA GAAAAAACCT
AAAAAAATAT TTATTGACGT ATACACTAAT TGGTGTGGAC CTTGCAAGAT GTTAGCGAAC
AACACTTTTA AGAACAAAGA CTTAGTAAAG TATGTGAATG ATAATTACTA CGCTGTAAAG
TTCAATGGTG AAGGTAACGA AGTAGCAAAC TACAAAGGAC AAAAGTTTGA GAACAAAGGC
TATGACCCCG CATTGGCTGA ACGCCGTAAC GCCACACACC CACTTACTGG CTATATGCAA
GTACAGGCTT ACCCAACAAT GGTGTTCTTA GACGAGAATA ACGATTTGAT AACAGGTATC
ACCGGGTATA TGTCGCCTAC TCAATTAGAA CTCTACTTGA AGATGTTTAA CAACAATGAT
TACAAAAAAA TCACTACTCA ACAAGAGTTT CAAGTATATC AATCGAAGTT CAAACCTACA
TTTAAAAACT AA
 
Protein sequence
MTKKLIAIVA FVLVATATLE AQEIKWMTFD QAIAAQKKKP KKIFIDVYTN WCGPCKMLAN 
NTFKNKDLVK YVNDNYYAVK FNGEGNEVAN YKGQKFENKG YDPALAERRN ATHPLTGYMQ
VQAYPTMVFL DENNDLITGI TGYMSPTQLE LYLKMFNNND YKKITTQQEF QVYQSKFKPT
FKN