Gene Coch_0169 details

Gene Information

• Locus tag: Coch_0169
• ID: 8366571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 205471
• End bp: 205965
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 644982586
• Product: phosphoribosyltransferase
• Protein accession: YP_003140293
• Protein GI: 256819014
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.48034
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACAGA TATTAAACCA CACTGATATT GAACACAAGA TAAGACGGAT TGCTTATCAG 
ATTTACGAAA CACACCTCAA TGAAGAGGAG ATTGTGCTAG CAGGCATTAA TGGCAATGGC 
TATGTGTTTG CTGAGAAACT TGCTGTAGCA CTTGCAAGTA TAGCCCCCCT TAAAGTAGTT 
TTATGTCAAA TTATAATGGA TAAGAAGAAC CCATTGGCAG GCACTGCTAC TTCTATTCCT 
GCGGAACAAT ACACCAATAA AGCAGTGATA GTGGTAGACG ATGTGCTCAA TTCAGGACGT 
ACGCTCATCT ATGGGGTAAA ACACTTTTTG GAAGTCCCCT TAAAGCGACT TACTACCGCT 
GTATTAGTTA ATCGCAATCA CAAGGATTAT CCTGTAAAAG CCGATTTTAA AGGCATATCA 
CTATCTACTT CACTGCAAGA ACACGTTTCG GTAACATTCG ACACAAGTAA GTATAGTGTT 
GATTTATCAA ATTAA 

 

Protein sequence

MTQILNHTDI EHKIRRIAYQ IYETHLNEEE IVLAGINGNG YVFAEKLAVA LASIAPLKVV 
LCQIIMDKKN PLAGTATSIP AEQYTNKAVI VVDDVLNSGR TLIYGVKHFL EVPLKRLTTA 
VLVNRNHKDY PVKADFKGIS LSTSLQEHVS VTFDTSKYSV DLSN