| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0156 |
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| Symbol | |
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| ID | 8366558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 182840 |
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| End bp | 184600 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644982575 |
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| Product | DNA mismatch repair protein MutS domain protein |
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| Protein accession | YP_003140282 |
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| Protein GI | 256819003 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATG ACAAATTACG AATGACAACA AATTCATATA AAGAAAAACT TTCAGAGGCA
ACACAGCAAT ACCTAAAACT TACTAAACAA TACAACCAAA TTAGCTTCCT CCGATTAGCT
GAAATGCTAC TTATCATTTG GTCAGTATAC AAACTTATAA AAGCTCCATC AGTAGTAATG
GGGCTATTTT GTATGCTTAC TATTGTGGTT TTCCTTCTTT TGATAGTAAA ACACAAGAAA
ATAAGTGCGT TGCGCAGTAT CGCTCAAACT AAAATACGCC TCAATGAGCA GGAAATTGCA
TTTTTAGAAC AACATACTTT CTTCACCGAT AACGGCAAAG ATTTTCAAGA AGAAAACCAC
CCTTATGCTT ACGATTTGGA TATTTTAGGT GAACATTCAC TCTATCATTA TCTTAACCGT
ACGCATACTT TCTTAGGCAG AAAACTTTTA GCCGAGCGAC TTCTCTCTCC TTCTTCTGAG
GACATTATCA ACACACAAGA ACAGATAAAA GCACTTACTC CCGACCTAAG CTGGCGACAA
ACCTTTACTG CTTATGCTCA ACAAATAGAT GACAGCAAAG ATTTTTACAT TAAACTACGC
ACTTGGGCAG GTAGCACTGT GAAACTATTA AGCAAAACAA TGCAATATAC TCTCATTGTT
CTACCTATAT TCCTCATCAT AAGTCTTTTG ATAGGATATG GAAACGACAA CGAACTACTA
AAAAGCGTTG GAAAGTTCTT AATCACTCTA AACTTGCTAC TGTTTTTCTC TTTTATTGGT
AAAATGACGA AAGAAAAACT CGGTTTTGAG CGTACTTATA CAATGTTATA TGCTTTTAAG
GAGTGTATTG CACAAGTAGA AGCGCGTTTC CCTGAGAAAA ACAAACAAGC AAGCGCTAAA
ATAGCTCAAC TTTCCCGATT GTTAGACGAT TTGGACAACG TGAGTAATAT ATTAGTCTCT
ATACCCCTAA ACCTTTTCTC TTTTTATCAC GTACATCGTT ATCAGCAACT TTTGCAATGG
AAGGCGCAAT ATGCAAGCTG TATTGAAGAA TGGTTAGAGT CGGTGGGGGA AACGGAAGTG
TTGTGCAGTT TTGCTAACTT TAGTTATAAC AACCCTGAAT TCGTTTATCC TACCCTCAAT
AATGATTATA AAATAGCTTT TGAAGCCGTA GGACACCCAC TTATCCCTTC TGAACATCGG
ATTACCAATG ATATTACACT GGGAGAGCAC GCTTTTGTAT TGCTTACGGG CTCTAATATG
TCGGGTAAGA GTACTTTCTT GCGCACTTTG GGAGTTAATA TGTTGCTTAC CCTTGTTGGG
TTACCTGTTT GTGCGCGCAA AGCCAATATA CACCCTTTGC GTTTACGCGT CTCTATGCGT
CTTGCTGATT CGCTTAACGA CGGCAAATCG TATTTCTTTG CTGAAATCAA TCGTATACAG
CAGATAATGG AAACCTTAGA GGACGAACGT TGCTTTGTGC TCTTAGACGA AGTACTACGG
GGTACTAATT CAGAAGACAA ACAGTACGGC ACTATTAAGA TTATCGAACG ATTGCTTTCC
TTACAAGCTT TGGGCGTGCT GGCTACTCAC GATATAGAAG TGTGTAAACT TACTGAACAA
TATCCTCATC AACTTCAAAA TAAATGCTTT GAGTCTGACA TCACCAATGG AGAACTCACT
TTCGACTATA AGTTAAGAGA GGGCGTTTGC CAAAACAAAA ATGCTACTTT CTTGATGAAA
AAATTGGGAA TCATTAGGTA A
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| Protein sequence | MMNDKLRMTT NSYKEKLSEA TQQYLKLTKQ YNQISFLRLA EMLLIIWSVY KLIKAPSVVM
GLFCMLTIVV FLLLIVKHKK ISALRSIAQT KIRLNEQEIA FLEQHTFFTD NGKDFQEENH
PYAYDLDILG EHSLYHYLNR THTFLGRKLL AERLLSPSSE DIINTQEQIK ALTPDLSWRQ
TFTAYAQQID DSKDFYIKLR TWAGSTVKLL SKTMQYTLIV LPIFLIISLL IGYGNDNELL
KSVGKFLITL NLLLFFSFIG KMTKEKLGFE RTYTMLYAFK ECIAQVEARF PEKNKQASAK
IAQLSRLLDD LDNVSNILVS IPLNLFSFYH VHRYQQLLQW KAQYASCIEE WLESVGETEV
LCSFANFSYN NPEFVYPTLN NDYKIAFEAV GHPLIPSEHR ITNDITLGEH AFVLLTGSNM
SGKSTFLRTL GVNMLLTLVG LPVCARKANI HPLRLRVSMR LADSLNDGKS YFFAEINRIQ
QIMETLEDER CFVLLDEVLR GTNSEDKQYG TIKIIERLLS LQALGVLATH DIEVCKLTEQ
YPHQLQNKCF ESDITNGELT FDYKLREGVC QNKNATFLMK KLGIIR
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