Gene Coch_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0110 
Symbol 
ID8366512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp131533 
End bp132600 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content41% 
IMG OID644982529 
Productfructose-bisphosphate aldolase 
Protein accessionYP_003140236 
Protein GI256818957 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01520] fructose-bisphosphate aldolase, class II, yeast/E. coli subtype 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.911808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACATA ACATTAAAAA AGGCGTAATT CTTGGAAAAG AAGTACAAGA AGTATTCAAA 
TACGCTAAAG AAAAAGGCTT TGCTCTTCCT GCAGCCAACG TTATCAGTTC AAACTCTATC 
AACGCTGCAT TAGAAACTTC AGTAGCTGTA AATGCCCCAA TGATTATCCA ATTTTCTAAC 
GGTGGTGCTC AGTTTATGGC TGGTAAAGGA TTGAATAACG ACAACCAACG CGCTTCAGTT 
CTCGGAGCGG TAGCAGGTGC TAAACACGTT CACCAATTGG CAGAAGCCTA TGGAGCATCT 
ATCATTTTGC ACACTGACCA CTGCGCTAAA AAATTACTTC CTTGGCTTGA CGGTATGCTT 
GAAGCATCAG AAAAACACTT CAAAGAAACA GGTAAACCAT TGTTCAGTTC TCATATGATT 
GACCTATCGG AAGAGCCTAT CAAAGAAAAT ATTGAAACTT GCAAACGTTA TCTTGAACGT 
ATGAGCAAAA TGGATATGAC TTTGGAAATA GAACTCGGTA TGACCGGTGG TGAAGAAGAC 
GGGGTAGACA ACTCACACGT AGATAGTAGC AGGCTCTTCA CACAACCAGA AGACGTAGCT 
TACGCTTACG AAGAACTTTC TAAAATTAGC TCACAATTCA CCATTGCAGC TGCTTTTGGT 
AACGTTCACG GGGTGTACAA ACCTGGCAAT GTGAAATTGA CACCAAAAAT TTTAAGAAAT 
TCACAAGACT ACGTTTCAAA GAAATACAAT TTGCCTCACA ACGCACTTGA CCTCGTATTC 
CACGGAGGTT CAGGCTCTAC CCTCGAAGAA ATCCGCGAGG CTATTTCTTA TGGTGTAATC 
AAAATGAATA TTGATACTGA CTTGCAATAC GCTTTCACTG AAGGTGTTCG CGACTATATG 
AAAGCTAAAT CAGCTTACTT GCAAGGACAA ATAGGTAACC CAGAAGGTCC CGAAGCGCCT 
AACAAGAAAT ACTACGACCC ACGCGTATGG CTTCGTGAAG GCGAAAAGAC ATTTGTTACT 
CGTTTGAAAA AAGCGTTTGA AGACCTTAAC AACGTAAATA CTTTATAG
 
Protein sequence
MAHNIKKGVI LGKEVQEVFK YAKEKGFALP AANVISSNSI NAALETSVAV NAPMIIQFSN 
GGAQFMAGKG LNNDNQRASV LGAVAGAKHV HQLAEAYGAS IILHTDHCAK KLLPWLDGML 
EASEKHFKET GKPLFSSHMI DLSEEPIKEN IETCKRYLER MSKMDMTLEI ELGMTGGEED 
GVDNSHVDSS RLFTQPEDVA YAYEELSKIS SQFTIAAAFG NVHGVYKPGN VKLTPKILRN 
SQDYVSKKYN LPHNALDLVF HGGSGSTLEE IREAISYGVI KMNIDTDLQY AFTEGVRDYM 
KAKSAYLQGQ IGNPEGPEAP NKKYYDPRVW LREGEKTFVT RLKKAFEDLN NVNTL