| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1962 |
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| Symbol | |
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| ID | 5708459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 2038779 |
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| End bp | 2039414 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641276471 |
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| Product | deaminase-reductase domain-containing protein |
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| Protein accession | YP_001541768 |
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| Protein GI | 159042516 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTGA AACCCTACGT AATTGCAATA GCGTCAATAA CTATGGATGG AAAAATAGCT
AACCCCTACA TTAGAAATAG GTTCACGTGC AGATATGATT TAGAGAGGTT GTTTAAGGCT
AGGGATGAGG TAGACGCCAC CATAGTGGGG GCTCAGACTG TAATTGATGT TGATGGAACG
TACACACCCA AGACAGGTAA GCAGATACTC AGGGTGCTTA TAGATGGGGC CTTCAGGGTT
CCCTTAGAGT CAAAGTTCTT CAACTCACCT GCACCAGCCC TAGTTGCCGT TACTGAGAGG
GCTCCAAGGG CTAAGATTGA GCTTGCCAGG AAGGCTGGGA TAGAGGTTAT GGAGTTTGAT
AAGCAGGTTG ATGTTGAAGT ATTATTAAGT AAGCTTACTG AGAGGGGTAT TAAGAAGGTC
TTAGTGGAGG GTGGTGGTGC TGTTTTCTGG CAATTCTTCT CCAGGAACCT AATTGATGAG
GTTAGGTTAA CAATAGCCCC CTTCATGATG GGTAAGGGTA CAAGCCTCAT AGAGGGTGAT
TCACTTAAGA TTGATCAATC CCCAAGGTTT AAGCCAGTTA AATGGTACTT ATGCGAGTGC
GGTAGGGAGG TTGTTATTCA TTACACTAGG GAGTAG
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| Protein sequence | MNVKPYVIAI ASITMDGKIA NPYIRNRFTC RYDLERLFKA RDEVDATIVG AQTVIDVDGT
YTPKTGKQIL RVLIDGAFRV PLESKFFNSP APALVAVTER APRAKIELAR KAGIEVMEFD
KQVDVEVLLS KLTERGIKKV LVEGGGAVFW QFFSRNLIDE VRLTIAPFMM GKGTSLIEGD
SLKIDQSPRF KPVKWYLCEC GREVVIHYTR E
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