| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1956 |
|---|
| Symbol | |
|---|
| ID | 5708974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 2032517 |
|---|
| End bp | 2032723 |
|---|
| Gene Length | 207 bp |
|---|
| Protein Length | 68 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641276465 |
|---|
| Product | CopG family transcriptional regulator |
|---|
| Protein accession | YP_001541762 |
|---|
| Protein GI | 159042510 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAAA CTAAGTCGGA GGAGAAGATG ATACTAATAT CAGTCCACAT ACCGCGACAG
ATGCTTGAGG AACTTGATGA ATTAGTTAGG AGGGGAGTAT TCCCTTCAAG GAGTGAAGCC
ATTAGAGTAG CCATAAGAGA CCTCCTCCTC AGGGAGAGTG CTAGGGGGGT TGAGCAAGGT
AGTGGAATGC TAATGAGTGG TAGGTGA
|
|---|
| Protein sequence | MPKTKSEEKM ILISVHIPRQ MLEELDELVR RGVFPSRSEA IRVAIRDLLL RESARGVEQG
SGMLMSGR
|
|---|
| |