| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1953 |
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| Symbol | |
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| ID | 5708971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 2031031 |
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| End bp | 2031567 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641276462 |
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| Product | THUMP domain-containing protein |
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| Protein accession | YP_001541759 |
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| Protein GI | 159042507 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1818] Predicted RNA-binding protein, contains THUMP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGTAA TGTCGTTTAA CCTGGTGATA TCCACGGGTA GGGGTGTTGA GGGTAAGTGT
ATAGCTGAGT TGAGGAGGGT GGGTGAGTTG CTTTCCGTTA ATGTTAGGAC ATTCTTCACG
GGCTTTGATG GATTACTAAC GGGTAGGGTG GATATGGATC CAGTGGGGTT TAGTAATAGT
TTAAGGGAGT TGGTTACCAG TAATGCCTTT GTACCAAGGT TCATACTTAA GGTTGTGCCC
ATTCAGGAGG TGGTTAAGAC TAATGTGGAT GAGATTGTTA GTAAGGCTGT CCAAATGGGT
AATTCCATGA TTGCTGAGGG GGAAACTTAT AAGATAGAGG TTAGGAGGAG GGGTGTACTC
TTTGATAGAA TGGCTATTAT AGATAAGGCG GCACCGCAGA TATTAAGGAA GGTTAAGTTG
GAAAATCCTG ATAAGGTGAT TCAAATAGAG GTGTTCCCAT CGAAAACTGG TATAGCTGTG
ATAAGGGAGA GTGATATTTT CAGTCTACTT AAAGTAACAA TAAGTGGTCA ACATTAA
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| Protein sequence | MVVMSFNLVI STGRGVEGKC IAELRRVGEL LSVNVRTFFT GFDGLLTGRV DMDPVGFSNS
LRELVTSNAF VPRFILKVVP IQEVVKTNVD EIVSKAVQMG NSMIAEGETY KIEVRRRGVL
FDRMAIIDKA APQILRKVKL ENPDKVIQIE VFPSKTGIAV IRESDIFSLL KVTISGQH
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