| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1770 |
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| Symbol | |
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| ID | 5709105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1843858 |
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| End bp | 1844937 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641276281 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001541583 |
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| Protein GI | 159042331 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.952507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTCA ACCTACTTAA AGAGGAGCTT AGACGAGCAA TAAGTGAGTA TGGTTTCAAT
GAACCCACTG AGGTTCAAAG GAGTGTCATC CCTAAGATAC TTGATGGCTT TAATGTAGCC
ATGCAGGCCA GGACTGGAAG CGGTAAAACT GCAGCGTACC TGCTTCCAAC CATGAGTATG
ATGAAGGGCG ACCTAGGTGA AGCACTGGTG ATCTCACCAA CACGTGAACT TGCACTTCAA
ATAATGAATC AATTCCTAAT CTTCAATAAG TACACTAAAT TCAACAGTGC AGTTGTGTAT
GGTGGTGTTG GGTATAGTGG CCAAGTTAAG GCCCTCAGGG ATGCATCACT AATAGTGGCA
ACCCCAGGTA GATTGCTTGA TCTTACCGGT AAGTCGATTG TGGATTTAAG CAATGTTAAG
TACCTCATTA TTGATGAAGT GGATAGGATG CTTGACATGG GTTTCATAAA GGATGTATAC
ACTATATCAA GCCTAACTGG TAATAGGAAG CAAACCCACG CGGCCACGGC AACATTACCC
AGTGAGGTTC ATGATGTTGT TAAGAGGGTT TTAAGGAATC CATTATTCAT AAGGGTGAGT
AATCATGAGT ATGAATTACC TATGGTTGAT CAATTGGTTT ACCTCGTGGA TGGCTCATGG
AGGAGTAAGT ATGGGTTAAC TGGGAAGGTG CTTGAAGGCA AGTCAATAAT ATTCGTTAAC
ACTAGGGAAA GAGCCTACAG GCTGTATAGG CAGTTGCGTA ATGATGGTTT AAGGGTGCTT
CTACTGCATG GTGGCATGAG GCAGGAGACT AGGGAGAGTA CTCTCCGTAG GTTTAGGGAA
TTAGACTCCG GTTCATTAAT CTCAACTGAC TTAGCGTCAA GGGGCCTCGA TATAATTGAT
GTAAACCTAA TACTTAACTT TGATGCACCT AGGGATCCTG AAACATACAT ACACAGGATT
GGGAGAACTG CAAGGCTTAA TAGGAGAGGT AAGGCAATAA CCCTAGCCAC TAGGGATGAG
TTAAGGATAT TGAATGAGGT AACTAAGTTA ACGGGCTCAG GCTACGTTTT AGCTAATTAA
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| Protein sequence | MVFNLLKEEL RRAISEYGFN EPTEVQRSVI PKILDGFNVA MQARTGSGKT AAYLLPTMSM
MKGDLGEALV ISPTRELALQ IMNQFLIFNK YTKFNSAVVY GGVGYSGQVK ALRDASLIVA
TPGRLLDLTG KSIVDLSNVK YLIIDEVDRM LDMGFIKDVY TISSLTGNRK QTHAATATLP
SEVHDVVKRV LRNPLFIRVS NHEYELPMVD QLVYLVDGSW RSKYGLTGKV LEGKSIIFVN
TRERAYRLYR QLRNDGLRVL LLHGGMRQET RESTLRRFRE LDSGSLISTD LASRGLDIID
VNLILNFDAP RDPETYIHRI GRTARLNRRG KAITLATRDE LRILNEVTKL TGSGYVLAN
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