Gene Cmaq_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1621 
Symbol 
ID5708866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1695385 
End bp1696239 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content44% 
IMG OID641276129 
Productendo-1,4-beta-glucanase B 
Protein accessionYP_001541434 
Protein GI159042182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0135255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAC TAATACCCCT GGTTAATGGT AATTACAAGC TAATACAATG GGAGCCATTA 
GGTGGAGTAC ATGGTGCTGA TATTGAGTGT ATTCACGTGA CTCCCAATGT ATGGAATATT
GATAAATCAT CCGTGGGTAC GGTGCAGATT GAGTATGAGC CACAGGTTGG TTGCTTGAGA
TTCAGTATTG ACTTCCCTAG GATAAGCATA AGGCATAATG TAGGTGTTGC AGCGTATTCC
GAGGTCATTT ATGGTCATAA ACCATGGGGT CCAACAACAT GCATGGATCC TCAATTCAAA
TTCCCAATCA AGGTTAATGA ATCCAAGGGA CTTTACTCAT ACGTTAACTA CAATGTTAAA
TCCCGCTCAC CGGACGACTC CATATTCAAC ATAGCCTACG ACCTTTGGTT AACCACAAGC
CCTAACTTAA CCAATGGACC CCAGCCTGGT GACGTGGAGG TTATGATTTG GTTATACTAC
CATGGCCAGA GACCTGCCGG TAGGCTTATT GGGGAGTTGA GAATGCCCAT TACCCTAGGG
GACAGTGAGG CTGCTAGGGA TTTTGAAGTA TGGGTTGCGG ATACGGGTAT TGGTATTGGG
GAATGGGCAG TGGTCACCTT TAGGATTAAG GACCCAATCA AAGGAGGCTT AATTGGCGTT
AATTTAATTA ATTACATTGA ATCAGCCTTC AAGACCCTTG AGGAGCTTAA CCCAGTGAAG
TGGAGGTATG GGGATTTACT GAACAAGTAC CTGAATGGTA TTGAATTCGG TTCGGAATTC
GGCAATGTAT CCTCAGGCAT GATTAAGCTT AACTGGGAGT TATGTGGTTT AAGCCTGGTG
AAGGATTCAT CCTAG
 
Protein sequence
MLKLIPLVNG NYKLIQWEPL GGVHGADIEC IHVTPNVWNI DKSSVGTVQI EYEPQVGCLR 
FSIDFPRISI RHNVGVAAYS EVIYGHKPWG PTTCMDPQFK FPIKVNESKG LYSYVNYNVK
SRSPDDSIFN IAYDLWLTTS PNLTNGPQPG DVEVMIWLYY HGQRPAGRLI GELRMPITLG
DSEAARDFEV WVADTGIGIG EWAVVTFRIK DPIKGGLIGV NLINYIESAF KTLEELNPVK
WRYGDLLNKY LNGIEFGSEF GNVSSGMIKL NWELCGLSLV KDSS