Gene Cmaq_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1566 
Symbol 
ID5709634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1642974 
End bp1643288 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content38% 
IMG OID641276074 
ProductDNA polymerase beta subunit 
Protein accessionYP_001541379 
Protein GI159042127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.717428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATGATT ATTTAATTAA TGAAGCGAAG AAAAGGCAGG AGATCTTCAG GAATCTAGAC 
AAATACTTAA GAATCATTAA GGACACTGTT AAGGAATTGG ATCAGGGGGC TGAGGTTTAT
TTATTCGGAT CAGTGGCTGA GGGAACGTAC ACCTTATCCA GTGACATAGA CGTATTAGTG
GTAACTATGC TAAATCCAGG CATTGTACTT AAGAGGCTTT GGGAAGTGGG CATTAGGGAT
CCCTTTGAAG TACATGTACG GACACCAGAT AAATTAAAAT ACTACAGTAG ATTCAGTAAA
TTAATCAAGA TGTAA
 
Protein sequence
MYDYLINEAK KRQEIFRNLD KYLRIIKDTV KELDQGAEVY LFGSVAEGTY TLSSDIDVLV 
VTMLNPGIVL KRLWEVGIRD PFEVHVRTPD KLKYYSRFSK LIKM