Gene Cmaq_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1559 
Symbol 
ID5709906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1639725 
End bp1640579 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content42% 
IMG OID641276067 
ProductABC transporter related 
Protein accessionYP_001541372 
Protein GI159042120 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATT CAAACAATAT AATAGTGGAG GTTAATGGAC TATGGAAGGC ATTCAATGAT 
GTGATTGTTA ATGAGGATAT TAGTATTCAT GTTGATGAAG GTGAAGTAGT ATCCATACTG
GGTCCAAATG GAGCTGGTAA AACCACACTA CTTAGGCAAA TCTACGGTGA ATTAAGGCCT
GATAAGGGTA GGGTCTTAAT AATGGGTATG AATCCAGGTA AGGCTAAGGA TAGGGGCATA
ATGAGTGTTG TCCCCCAGGA GGCTACACCA TTTCAATTAC TTAAGGTTAC TGAGCATGTT
GAGATGCTTG TTAGGCTTAG GGGTGTACCT AAGGGTATGG TTAAGCATTG TGTTAAGGAA
GCTATTAATG CAGTTGGCCT AGGGGATTAC GAGAATAAGC TCATTGATGA ATTATCAGGA
GGCATGAAGA GACTAGTCCT AGTGGCCTCA GCAATAGCCT GTGGACCAAG ATTAATAATA
CTTGATGAAC CAACCGTTGG TATTGATGCC CAGAATAGGA GGAGTATTTG GGACGCCATT
AGGGGCGCCA GGGATAATGG ATCAGCGATA ATATTAACCA CGCATTATGT TCATGAGACA
GAGGAACTCA GTGATAGAGT CTACTTAATT AATAGGAGGA TACTCATGGA GGGTTCACCA
AGTGAACTTA GGAGGAGGCT ACCTTGGGTT GAGGTCAGGG GCGATAATGG TGATAAGCCG
ATTAGGGTTA ATTGGGATGA GGCAATTAAT ATAATTAATG AGTTAGTTAA GAGGAGGGTT
AGGTTTGAGG TTAAGGAGCC TTCCCTTGAG GACGTTTTCA TTGAGGTATT CGGTGGTGGT
CGTGAGACTG AGTAA
 
Protein sequence
MQNSNNIIVE VNGLWKAFND VIVNEDISIH VDEGEVVSIL GPNGAGKTTL LRQIYGELRP 
DKGRVLIMGM NPGKAKDRGI MSVVPQEATP FQLLKVTEHV EMLVRLRGVP KGMVKHCVKE
AINAVGLGDY ENKLIDELSG GMKRLVLVAS AIACGPRLII LDEPTVGIDA QNRRSIWDAI
RGARDNGSAI ILTTHYVHET EELSDRVYLI NRRILMEGSP SELRRRLPWV EVRGDNGDKP
IRVNWDEAIN IINELVKRRV RFEVKEPSLE DVFIEVFGGG RETE