Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1559 |
Symbol | |
ID | 5709906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1639725 |
End bp | 1640579 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641276067 |
Product | ABC transporter related |
Protein accession | YP_001541372 |
Protein GI | 159042120 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAATT CAAACAATAT AATAGTGGAG GTTAATGGAC TATGGAAGGC ATTCAATGAT GTGATTGTTA ATGAGGATAT TAGTATTCAT GTTGATGAAG GTGAAGTAGT ATCCATACTG GGTCCAAATG GAGCTGGTAA AACCACACTA CTTAGGCAAA TCTACGGTGA ATTAAGGCCT GATAAGGGTA GGGTCTTAAT AATGGGTATG AATCCAGGTA AGGCTAAGGA TAGGGGCATA ATGAGTGTTG TCCCCCAGGA GGCTACACCA TTTCAATTAC TTAAGGTTAC TGAGCATGTT GAGATGCTTG TTAGGCTTAG GGGTGTACCT AAGGGTATGG TTAAGCATTG TGTTAAGGAA GCTATTAATG CAGTTGGCCT AGGGGATTAC GAGAATAAGC TCATTGATGA ATTATCAGGA GGCATGAAGA GACTAGTCCT AGTGGCCTCA GCAATAGCCT GTGGACCAAG ATTAATAATA CTTGATGAAC CAACCGTTGG TATTGATGCC CAGAATAGGA GGAGTATTTG GGACGCCATT AGGGGCGCCA GGGATAATGG ATCAGCGATA ATATTAACCA CGCATTATGT TCATGAGACA GAGGAACTCA GTGATAGAGT CTACTTAATT AATAGGAGGA TACTCATGGA GGGTTCACCA AGTGAACTTA GGAGGAGGCT ACCTTGGGTT GAGGTCAGGG GCGATAATGG TGATAAGCCG ATTAGGGTTA ATTGGGATGA GGCAATTAAT ATAATTAATG AGTTAGTTAA GAGGAGGGTT AGGTTTGAGG TTAAGGAGCC TTCCCTTGAG GACGTTTTCA TTGAGGTATT CGGTGGTGGT CGTGAGACTG AGTAA
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Protein sequence | MQNSNNIIVE VNGLWKAFND VIVNEDISIH VDEGEVVSIL GPNGAGKTTL LRQIYGELRP DKGRVLIMGM NPGKAKDRGI MSVVPQEATP FQLLKVTEHV EMLVRLRGVP KGMVKHCVKE AINAVGLGDY ENKLIDELSG GMKRLVLVAS AIACGPRLII LDEPTVGIDA QNRRSIWDAI RGARDNGSAI ILTTHYVHET EELSDRVYLI NRRILMEGSP SELRRRLPWV EVRGDNGDKP IRVNWDEAIN IINELVKRRV RFEVKEPSLE DVFIEVFGGG RETE
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