| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1517 |
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| Symbol | |
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| ID | 5709934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1598284 |
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| End bp | 1599237 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641276026 |
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| Product | CRISPR-associated RAMP Cmr4 family protein family protein |
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| Protein accession | YP_001541331 |
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| Protein GI | 159042079 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1336] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02580] CRISPR-associated RAMP protein, Cmr4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.476222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCAG GCACTGGTAG CGGTGGTAAG ATCGTGGATT TAGAGGTTCA GAAGGATGAA
TTTGGGATTC CCGTTATATG GTCCAGCAGC CTTAAGGGTG CCATTAGGAG CTCCCTCACA
CTAAACCGCT CAAGCAATGA CCAGCGCCAT AAAGTGCTTA TTAATGCGGT TTTCGGGCCC
GAGCCTGGCA CTGACGAGGT GAGTGAGTAT TCCTCTGTGG TTAATTTCCT AGATGCCAAG
CTCCTGCTAA TGCCCATTAG GTCGCTAAGG GGTGTTTGGG CCTACGCAAC CTCGAGGCAT
TTGCTTAATT ACTATAGGAC TTACGTGGAT GCCCTCGAGA CACTTAACAA CAACTTAAGC
AAGTACCAAA ATGCCCTGGA CCAATTAATC AAACTCACGG AAAACATTGA CCAGGGCACT
GCAGTGGTTA GTAAGGGGGA CCTTGTCATT AGTGGTGGGA AAGCCGTACT CAATGAAATC
GAGTTCAATG CCAATGTAAA TGTCAAATTA AATGAGAAAT TAAATGAAGT TGTTAATAAA
GCGCTACCTA ACGTCATTGC TGAGAGGGTT AAGGAGAGAG GCTTGGTGTT AGTTAGTGAT
GATGATATGA TGGAGTTGAT TAAGAGAAGC ATCATTATAC AAACAAGGGT AAGGCTTGAT
TACTCCAAAA AGACCGTAAC TGAAGGCGGG CTCTGGGAGG AGGAGTACCT ACCCCAGTTC
ACTGTTTTCG TGTCTGGCGT GGTGTGCAGT AAACCTAGAA TTAATGAGAA ATCCTTCAAG
GAAAAGGTGG GTGATTCAAG TGATGTCCTA CAGAAGTTCA CTAACATGAA GAATAACGCA
GAGGAGGTAT GCAGGTACTT AAGGGGTGAG ACGCAAGATC CCTCCACGAT CTTCATACTT
GGTGGTAAGG AGACCTTAGG TAAGGGCTTA GCCAAGGTTT GGTGGTTGCC ATGA
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| Protein sequence | MHPGTGSGGK IVDLEVQKDE FGIPVIWSSS LKGAIRSSLT LNRSSNDQRH KVLINAVFGP
EPGTDEVSEY SSVVNFLDAK LLLMPIRSLR GVWAYATSRH LLNYYRTYVD ALETLNNNLS
KYQNALDQLI KLTENIDQGT AVVSKGDLVI SGGKAVLNEI EFNANVNVKL NEKLNEVVNK
ALPNVIAERV KERGLVLVSD DDMMELIKRS IIIQTRVRLD YSKKTVTEGG LWEEEYLPQF
TVFVSGVVCS KPRINEKSFK EKVGDSSDVL QKFTNMKNNA EEVCRYLRGE TQDPSTIFIL
GGKETLGKGL AKVWWLP
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