| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1512 |
|---|
| Symbol | |
|---|
| ID | 5709361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1593119 |
|---|
| End bp | 1594906 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641276021 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_001541326 |
|---|
| Protein GI | 159042074 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000264338 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.723812 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTTGT TGAGTAACCT TGATTGTAAT GAGTACCTTG GATTCATAAC TAGGCAGATG
CCCAGTTCCG TGAGTACTGA TGAGGCATTG GCATACATGG TCAGTGGGTG TGATGTCGGT
TTCCCAGTGG GTAGGTACGT GGTTATTGAG GATGATGGGG TTAAGTACCT GGCTAAGATT
GTGCAGTCTA GGGTCGAGGA TATATACTCC ATAGCCAAGA CACCGGTAAT CTCCCTGGAA
CAGGAGTTAA GTATGGAAGT ACGCTACATA CCAAGGTTCA TAGCCCTGGA GTTGATTAGA
GAATGTAGGG GAGATGCCTG CAGCCCAGTA ACCACTCCAC CACAGATACA TGCTAAGGTT
AGGTGGGCGA GGGATGGTGA AGTATCGAAA ATGCTCTCAC TACCGAGCAA TGGCGTGGAA
CTAGGGTACC TGGCACTACC CTCCGGTGAA GTGCTGAGGA GTGAATTCGT GAAAATACCC
ATAGACGCCC TTAAGCACCA TGTACTTGTG GTCGGCACCA CAGGTAGCGG TAAGACTCAG
CTCCTTAAGA ACATGGCCCT GGACCTAGTT AGGAATTACA GTGACTGCGT GGTGATTGCA
ATGGATGCCG TGGGTCATTA CCACCACTTG GCGATGGATA ATGTTGAAAC CAGGGTTGTA
ATACCAATGA CCAATTCATT GGTGGGTCGG TTATTGAGGA ATATAAAGGT AAGTGAAGCC
AAGGAATTAG CTAGGGAGTT TGCACGTAGG CTTGTAAGGT ACTACCTAAA TGAATTCTAC
ATACGTAGTG GATTAAAAAT AAGCGGTAAG GTGAACATAA AGGTTGCCTA CAGTAGGGAA
CAAGAAGACG CCGGGAAGGA TAAGGGTTAC GTGGTGAAGG TGAGTAAAGT GATTGTTAAG
GCTAAGATTA ACATTAATAA TAATGATAAG GAAATAAACG TGACGCTACT ACCTTGGGCT
CTAAAATCCA TTGATGTAAT GTACAGGATC AATGACATAA CAGGCTTACT CACGGAGCAG
GCTAAATTGT TCTACAGAAG GGTCATTAAT GAAGTCACCG ATGAATTACC TAGTAATGAA
AAGCCCACGT TTAAGGAGAT TTACGAGTAT TTAATAAGCC CAAGCAACCA GAGTGAAAGG
GGTAGGACAC TGGTTAATTA TGAGGCTATA GCCAATAAAT TAGGCATTCA CCCAAGTACC
TTAGAGAACA TAGTAAGGGC CATATTATCC CTAGTGGAGA CAAGGCTCTT TGACGTGGAG
CACAAGGCCG GTGACCACAA GCTGGTGGTT AAGGAACCTA ATTACAGGGA ATTATTTAAG
CAGGGTTATG TGGTTGTGGA TTTGAGGACC ACATCAAGCC TCAACCAGAG GATTATAGTC
TACAGGATCT TGAATAAATT ATTCAGAGCC ATGAAGCCGG GTGGTAAAAG GATTGCTGTG
GTTCTTGTTG ATGAGGCGCA CTTATTCTTC CCACAGACCA GGGATGAGAC GGAGAAGAGG
ATAATTGAGA ATCAGTTAAC CAGGATTGCC AGGCTCGGTA GAAGCCGCGG CATAGCCGTA
GTATTCGCCA CGCATATGCC GGATGACTTA AACGACGCAG TACTACAATT AACAAACACT
AAGGTAATCC TCAGGAGTGA CGAGAGGGTC CTTGAGAAAC TCGGCATACC CACCAGTGAG
AGGAGATTCC TCACAGTGAC TGATGCAGGC ATTGGTTACG TGAAGTCCTA CGCAATGAAG
TACCCAATCT ACATTAAGTT CGAGCCGAAG GCCTTCCACC TCGGGTAA
|
|---|
| Protein sequence | MTLLSNLDCN EYLGFITRQM PSSVSTDEAL AYMVSGCDVG FPVGRYVVIE DDGVKYLAKI
VQSRVEDIYS IAKTPVISLE QELSMEVRYI PRFIALELIR ECRGDACSPV TTPPQIHAKV
RWARDGEVSK MLSLPSNGVE LGYLALPSGE VLRSEFVKIP IDALKHHVLV VGTTGSGKTQ
LLKNMALDLV RNYSDCVVIA MDAVGHYHHL AMDNVETRVV IPMTNSLVGR LLRNIKVSEA
KELAREFARR LVRYYLNEFY IRSGLKISGK VNIKVAYSRE QEDAGKDKGY VVKVSKVIVK
AKININNNDK EINVTLLPWA LKSIDVMYRI NDITGLLTEQ AKLFYRRVIN EVTDELPSNE
KPTFKEIYEY LISPSNQSER GRTLVNYEAI ANKLGIHPST LENIVRAILS LVETRLFDVE
HKAGDHKLVV KEPNYRELFK QGYVVVDLRT TSSLNQRIIV YRILNKLFRA MKPGGKRIAV
VLVDEAHLFF PQTRDETEKR IIENQLTRIA RLGRSRGIAV VFATHMPDDL NDAVLQLTNT
KVILRSDERV LEKLGIPTSE RRFLTVTDAG IGYVKSYAMK YPIYIKFEPK AFHLG
|
|---|
| |