| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1500 |
|---|
| Symbol | |
|---|
| ID | 5709141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1580378 |
|---|
| End bp | 1581568 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641276009 |
|---|
| Product | natural resistance-associated macrophage protein |
|---|
| Protein accession | YP_001541314 |
|---|
| Protein GI | 159042062 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.146818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.532247 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCATAA GGGATGCAAT TAGGCTTTTT GGGCCAGCAT GGGTGGCTTT AATGGCTGAT
GCTGATGCAG CCAGCATACT GGGTGGTTTA TCCACTGGTG AGGTTTATGG GTATAGGTTA
ATGTGGTTTG TCCTATTGTT ATCAATCCCA ATATTCATAA TACAGGAGGC TGCTGGGAGA
CTGGGGGCTA TAACCGGTAA GGGTGTTGGT GAACTCATCA GGGAGTATTA CTCCAGGAGG
GTTTCCCTAG TCTCCATAGT TCCAATATTC CTAGTGGACT TCTTCACATA CCTAGCCGAG
TACGTTGGGA TTGCCATTGG GAGTTACTTA ATCGGCATTA ACCCGCTTAT CGGATTACTC
ACCTTCTTCA CACTGCACAT AATCATCGTG TTGACGAGGA AGTATGAGGT CACTGAGAGG
TACTTAATCA TAATCTCCCT ACTACTAATT ACCTCAACGT TAATCATAGT TGAGCCGAAA
CTATACTTCA CTGGTAGTGA CTTATTCTAC TTCTCAACAT CAAGGAGCTT CCTCTTCTTC
CTGGCAGTCA ACATAGGTGC TGTGGTTACT CCCCCATGCA TGCTAGTGTA CCAATCCTCA
GCAACGGCAA TGAAGTATGC GAATCCGGGA ATAAGGGTGA GTATTCATGA GAAGAATAAG
TGGATCACCA TGGAGACGCT AATGGGTGCT ATTGTAACCG AGTTAATAAT AGTGTTCGCT
GAAATCATAG GCTCATCAAT AGGTAGAGTT GATCCAACAG ACCCAATACA GTTACTGAGT
AGCCTAGGTA AAGTCCACTA CATGTTTGGG TTAGCCCTAG TTAGTGCAGG ATTCCTAACA
CTAGTGGTGG TATCCCTAAG CAGCGCCTGG GGTTTACTGG AGGCCCTGGG TAAGAATAAT
TACGAAAACA CAATTAAAAT CTATGCCGCT GAATCAGTAC CAGCGGTGAT CATAGTTTCA
CTAATGCTTA ATAATTACTC AACACTACTT AACTTCGCCC TAACACTACT ATCCCTGGCA
CCAATAGTTA TAGCAATACC AGCAACCCTA ATTGGAATAC TAATCAGTAA TAGGAGGATA
ATGGGTCAAT ACGCCTACAC TAGGCTAAGA ACAATAATCT ACTTCACAAC AATAAGCATG
ATACTGACTG GGGGAGTAGT AGGAATCCTT AACACCTATC CCTTACCATG A
|
|---|
| Protein sequence | MSIRDAIRLF GPAWVALMAD ADAASILGGL STGEVYGYRL MWFVLLLSIP IFIIQEAAGR
LGAITGKGVG ELIREYYSRR VSLVSIVPIF LVDFFTYLAE YVGIAIGSYL IGINPLIGLL
TFFTLHIIIV LTRKYEVTER YLIIISLLLI TSTLIIVEPK LYFTGSDLFY FSTSRSFLFF
LAVNIGAVVT PPCMLVYQSS ATAMKYANPG IRVSIHEKNK WITMETLMGA IVTELIIVFA
EIIGSSIGRV DPTDPIQLLS SLGKVHYMFG LALVSAGFLT LVVVSLSSAW GLLEALGKNN
YENTIKIYAA ESVPAVIIVS LMLNNYSTLL NFALTLLSLA PIVIAIPATL IGILISNRRI
MGQYAYTRLR TIIYFTTISM ILTGGVVGIL NTYPLP
|
|---|
| |