Gene Cmaq_1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1491 
Symbol 
ID5709882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1566995 
End bp1567780 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content47% 
IMG OID641276000 
Productcarboxymethylenebutenolidase 
Protein accessionYP_001541305 
Protein GI159042053 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0546343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.398934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATC AAACCAACAT CAGCTTCAAA TCCTACGACG GCTCAAGTAT AAGCGCCTTC 
CTCGCGTCAC CTGAATCCTA TAAGTCAGCG GTAATAGTTA TTCACGAGAT CTTTGGGATA
ACTGAGTATA TTAGGAATGT TGCACGTAGA TTAGCCTCAC TGGGCTACCT AGCCGTGGCC
CCAAACCTAT ACTCAAGGCG TAGTGATGTA TTGAATGAGA GTAATATAGC CAGTGTAATG
AGAATGTTCT GGTCAATACC ACCGGAGAGG AGGAGTGATC CAAACGCTAT CAAGGAGTTG
ATTAATAGTT TGAGCCCAAC TGAGAGGATT ATTGCCGAGG AGCTTGTGCT TAATAGGGAG
TCCACTGAGG AGCGCATGGT TAAGGATATT GAGGCGACCT TCAACTACAT TAAGGAGACT
TATAAGCCAA TTAAACTTGG GGTAATTGGA TTCTGCATGG GTGGTGGCTT AGCCTTCGAA
TCATTAACAA GACTACCCTT CGATGCAGGA GTCATATACT ATGGTAGGGC TCCAAGGAAC
CTAGACGCCA TAGCCAACAT TAAGGCTGCG GTACTAGCAA TATACGCTGG TAACGATCCG
GGAATAAACC AGGGAGTCCC CAGTTTAATT GAGGCCGTGT TTAAGCATGG TTTACGCTTC
GAAATGGTAA TCTACCCAGG GACAAGACAC GCCTTCGCCA CTGAGGGTGG CCCAGCATAT
AATGAGGAGG CTGCTAAGGA CGCCTGGGAG AGGACGGTTA ACTTCTTCAA GAAGCACCTA
GGGTGA
 
Protein sequence
MINQTNISFK SYDGSSISAF LASPESYKSA VIVIHEIFGI TEYIRNVARR LASLGYLAVA 
PNLYSRRSDV LNESNIASVM RMFWSIPPER RSDPNAIKEL INSLSPTERI IAEELVLNRE
STEERMVKDI EATFNYIKET YKPIKLGVIG FCMGGGLAFE SLTRLPFDAG VIYYGRAPRN
LDAIANIKAA VLAIYAGNDP GINQGVPSLI EAVFKHGLRF EMVIYPGTRH AFATEGGPAY
NEEAAKDAWE RTVNFFKKHL G