Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1491 |
Symbol | |
ID | 5709882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1566995 |
End bp | 1567780 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641276000 |
Product | carboxymethylenebutenolidase |
Protein accession | YP_001541305 |
Protein GI | 159042053 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0546343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.398934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAATC AAACCAACAT CAGCTTCAAA TCCTACGACG GCTCAAGTAT AAGCGCCTTC CTCGCGTCAC CTGAATCCTA TAAGTCAGCG GTAATAGTTA TTCACGAGAT CTTTGGGATA ACTGAGTATA TTAGGAATGT TGCACGTAGA TTAGCCTCAC TGGGCTACCT AGCCGTGGCC CCAAACCTAT ACTCAAGGCG TAGTGATGTA TTGAATGAGA GTAATATAGC CAGTGTAATG AGAATGTTCT GGTCAATACC ACCGGAGAGG AGGAGTGATC CAAACGCTAT CAAGGAGTTG ATTAATAGTT TGAGCCCAAC TGAGAGGATT ATTGCCGAGG AGCTTGTGCT TAATAGGGAG TCCACTGAGG AGCGCATGGT TAAGGATATT GAGGCGACCT TCAACTACAT TAAGGAGACT TATAAGCCAA TTAAACTTGG GGTAATTGGA TTCTGCATGG GTGGTGGCTT AGCCTTCGAA TCATTAACAA GACTACCCTT CGATGCAGGA GTCATATACT ATGGTAGGGC TCCAAGGAAC CTAGACGCCA TAGCCAACAT TAAGGCTGCG GTACTAGCAA TATACGCTGG TAACGATCCG GGAATAAACC AGGGAGTCCC CAGTTTAATT GAGGCCGTGT TTAAGCATGG TTTACGCTTC GAAATGGTAA TCTACCCAGG GACAAGACAC GCCTTCGCCA CTGAGGGTGG CCCAGCATAT AATGAGGAGG CTGCTAAGGA CGCCTGGGAG AGGACGGTTA ACTTCTTCAA GAAGCACCTA GGGTGA
|
Protein sequence | MINQTNISFK SYDGSSISAF LASPESYKSA VIVIHEIFGI TEYIRNVARR LASLGYLAVA PNLYSRRSDV LNESNIASVM RMFWSIPPER RSDPNAIKEL INSLSPTERI IAEELVLNRE STEERMVKDI EATFNYIKET YKPIKLGVIG FCMGGGLAFE SLTRLPFDAG VIYYGRAPRN LDAIANIKAA VLAIYAGNDP GINQGVPSLI EAVFKHGLRF EMVIYPGTRH AFATEGGPAY NEEAAKDAWE RTVNFFKKHL G
|
| |