| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1405 |
|---|
| Symbol | |
|---|
| ID | 5709685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1481382 |
|---|
| End bp | 1481999 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641275916 |
|---|
| Product | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| Protein accession | YP_001541221 |
|---|
| Protein GI | 159041969 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0498001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTGA GGGGAGTGGT TAAGGTTGGG GTTGTTAACT ACGGTGTGGG TAATGTTGGA
AGCATCTTCA ATGCCCTACG TAGGATTGAG GCTGAACCAC TATTAATCAA TAATACCGCT
GACTTAAGGA GCGTGGACGC CGTAATACTC CCTGGGGTTG GTTCCTTTAA CTCAGCTATG
GTTAATTTAA GTAGGTTAAC TGATGAATTA AACAGGGTTA GGGGGAGTTC ACCCATATTG
GGCATATGCC TAGGCCTACA GTTAATGTTC AAGGGTAGTG ATGAGGGGGA GTTAAGGGGC
TTGGGTTGGT ATGATGGTTG GGTTAATAGG ATTAGGGGGC CAAGGGTGCC TCACATTGGT
TGGGATTACG TTAAGTTAAG TGGGGATTGT AACCTAGGGG TGGCTAGGGG TTACTACTAC
TTCATGCATA GTTACGCAGT GGTTAACCCG GTTAATGAAC CCCCATTTGT CGGCTTCACT
AAGTACGGTG ACTCAACAAT ACTGAGCGTA CTCTGCGATG AGGGTAACGC CACCTACGGT
ACCCAATTCC ACCCTGAGAA GAGTGGGAAA TTAGGCTTAA GTATTCTGAA TGGCTTAGTT
AATTTAGCTA GGAGGTGA
|
|---|
| Protein sequence | MRVRGVVKVG VVNYGVGNVG SIFNALRRIE AEPLLINNTA DLRSVDAVIL PGVGSFNSAM
VNLSRLTDEL NRVRGSSPIL GICLGLQLMF KGSDEGELRG LGWYDGWVNR IRGPRVPHIG
WDYVKLSGDC NLGVARGYYY FMHSYAVVNP VNEPPFVGFT KYGDSTILSV LCDEGNATYG
TQFHPEKSGK LGLSILNGLV NLARR
|
|---|
| |