Gene Cmaq_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1404 
Symbol 
ID5709684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1480947 
End bp1481333 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content45% 
IMG OID641275915 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001541220 
Protein GI159041968 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0477328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCTA ATGGTGTTAA TGTACTTAAG TTAAGCCCAG AGGAGGCTTC TAAGATTGCT 
GAATCCCTAC TGTATAGGCA TACTGATGGA ACCGTCGTGG CCGTGGCCCA GGATTACTTA
ACTAAGGATG TGTTAATGGT TGCGAACATG AATAAGGAAG CCGTTTTCAA AACATTAACC
ACAGGAATGG TTCACTACTG GTCCCTAAGC CGTAGGAGGC TTTGGTTAAA GGGGGAGACA
AGCGGCCACT ACCAGTATTT AATTGATTAC AGGATTGACT GCGATGGTGA TGCATTACTG
CTTAAGGTTT ACCAAGTGGG TAACGCATGC CACCTAGGTA CTAGGTCCTG TTTCGACGCC
AGGTACGTGA ATAGGATTCA TTTATAG
 
Protein sequence
MLPNGVNVLK LSPEEASKIA ESLLYRHTDG TVVAVAQDYL TKDVLMVANM NKEAVFKTLT 
TGMVHYWSLS RRRLWLKGET SGHYQYLIDY RIDCDGDALL LKVYQVGNAC HLGTRSCFDA
RYVNRIHL